Detail



ID : Ahg496069

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|496069|fgenesh2_kg.8__1885__AT5G59420.1
Sequence
TTCTTTTGTT TTAGTCTCCC TCCGCGTAGA AGAAGCTTCT CCGAGACTTG TCTCTGATTT GATTGAAGAA GAAGCTTGAT CGAAAATTCT CTTAGATTTC TATCAGGGCT TTAAAGAAGG TGAGATTACA TAGAGATCGT GTTCAAAAAA AAAATGGGGA GTCCAAAGAA AAACGAGAAC AAAGGCTTCT TCGCCGCCAT GACTTCTGGC TTCTCCATGT TCGGTAGCGC CATGTCGAGA TCTGTCAACG GGTTGCAAGG TAATGAAGGA GTTGAGGTTA TAAATCCAGA AGGTGGCAAA GAAGATGCAG AAGAGGAAGC TCAGAAAGGA CGGTGGAAGG ACGAGGAACG AGATAGTTAC TGGAAGATGA TGCAGAAATA TATAGGTTCG GATATTACCT CAATGGTGAC TCTTCCTGTT GTTATATTTG AGCCTATGAC TATGCTCCAG AAAATGGCTG AGATAATGGA GTATTCTCAC TTGTTGGATC AAGCAGATGA ATGCGAGGAT CCATACATGC GTTTAGTATA TGCTTCATCA TGGGCTGTAT CTGTTTACTT TGCCTTCCAA CGAACTTGGA AGCCTTTCAA TCCTATTCTT GGTGAGACAT ATGAGATGGT CAACCACGGT GGGGTTTCAT TTATTTCTGA GCAGGTTAGC CATCATCCCC CAATGAGTGC TGGTCATGCC GAGAACGAGC ACTTCATTTA CGACATCACA TCAAAGTTGA AAACTAAACT TTTGGGTAAC TCTGTTGATG TTTATCCTGT TGGAAGAACG CGTGTAACCC TCAAAAAAGA TGGTGTGGTT CTGGATTTGG TGCCGCCTCT CACTAAGATT CACAATTTAA TATTTGGACG AACCTGGGTT GACTCACCCG GGGAAATGGT CATGACAAAT TTAACCACTG GAGACAAAGT TGTACTTTAT TTCCAGCCAT GTGGCTGGTT CGGTTCTGGC CGCTATGAAG TTGATGGCTA CGTTTACAGC GCAGCTGAAG AACCGAAAAT CATGATGACA GGAAAATGGA ATGAGAAAAT GAGCTACCAA CCTTGTGATG CCGAAGGGGA ACCCCTACCA GGCACAGAGC TGAAAGAGGT GTGGCATTTG GCTGATGTCC CCAAAAACGA CAAATTTCAG TACACTCACT TTGCTCACAA GATAAACAGC TTCGACACAG CGCCTGCTAA GCTCTTGGCT TCAGACTCAC GTATCCGTCC TGATAGATAT GCCCTTGAGC AGGGTGACCT TTCTAAAGCT GGTGCCGAGA AGCACAGCCT TGAGGAGAGG CAAAGGGCCG AAAAGAGGAC CCGAGAGACA AAGGGACAAA AGTTCACTCC AAGATGGTTC GATCTAACGG ATGAGATCAC ACCTACTCCA TGGGGAGATA TTGAAGTATA CCAATACAAC GGGAAGTACA CAGAACACCG AGACACATCA GAGAGCTCAA GCAGTGCCTC CAATGAAACG GACCTAAAAT CGATAGAGTT TAATCCTTGG CAATATGGTA ATATATCAAC CGAATGAGGT AACTCTTATA GTTTAATATG TTATCTCTGT ATACGAATGC TG 
Length1572
Protein Sequence
Protein Residue
Map Locationscaffold_8: 17943247.. 17946342
Download Sequence
A.thaliana
AGI-codeAT5G59420.1
DescriptionOSBP(oxysterol binding protein)-related protein 3C
TAIR curator summary
Alias[ORP3C][OSBP(oxysterol binding protein)-related protein 3C]
Gene coexpression
MR
MR Locus Description
6 Ahg355148 calmodulin binding;transcription regulators
6.32456 Ahg943517 xanthine dehydrogenase 1
11.4891 Ahg475187 S-locus lectin protein kinase family protein
20.2485 Ahg489780 Leucine-rich repeat receptor-like protein kinase family protein
22.1359 Ahg934965 S-adenosyl-L-methionine-dependent methyltransferases superfamily protein
24.1661 Ahg934359 PLAC8 family protein
25.4558 Ahg924051 S-adenosyl-L-methionine-dependent methyltransferases superfamily protein
25.632 Ahg950719 exocyst subunit exo70 family protein H7
25.7682 Ahg470264 glutathione S-transferase 6
25.9808 Ahg489442 Protein kinase family protein with leucine-rich repeat domain
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression