Detail



ID : Ahg496140

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|496140|fgenesh2_kg.8__1956__AT5G60020.1
Sequence
ACCTGCTCTA AACAACGCCT CGGTGTCCAA CCTCACTTAA ATGGCGTTTC AGCTTCTCTT AGCTGTATTC TCTTGTGTTC TTCTTCTACC TCAACCTGCA TTTGGGATTA CAAGGCATTA TACGCTGGAA ATCAAAATGC AGAACGTGAC ACGTCTTTGC CACACAAAGA GCCTTGTTTC TGTAAATGGG CAGTTTCCAG GTCCTAAGCT TATTGCTAGG GAAGGTGACC AGCTTCTGAT CAAAGTCGTT AATCAAGTGT CAAACAACAT TTCTATCCAC TGGCATGGGA TCCGGCAATT ACGGAGTGGA TGGGCTGATG GACCAGCCTA TATAACCCAA TGTCCTATTC AGACAGGACA AAGCTATGTT TACAACTATA CCATTGTTGG TCAAAGAGGC ACTCTGTGGT ACCATGCTCA CATTTCATGG CTAAGATCAA CAGTCTATGG TCCACTTATC ATCCTTCCCA AACGCGGTGT TCCTTACCCG TTTGCTAAAC CTCACAAAGA AGTTCCCATG ATCTTTGGGG AGTGGTTCAA CGCAGACCCT GAGGCAATCA TTCGCCAAGC AACCCAAACA GGAGGCGGTC CTAATGTATC TGATGCTTAC ACGATCAACG GGCTTCCTGG TCCATTATAC AACTGCTCGG CGAAAGATAC ATTCAGACTG AGAGTGAAGC CAGGAAAAAC ATACCTTCTC AGGCTAATCA ATGCTGCACT TAATGACGAG CTCTTTTTCA GCATCGCAAA TCACACGATT ACGGTTGTTG AAGCTGATGC GATCTATGTT AAGCCATTTG AGACGGATAC CATCTTAATT GCTCCCGGCC AGACCACAAA CGTCCTGCTG AAGACTAAAT CTAGTTACCC GAGTGCCTCC TTCTTCATGA CTGCTAGACC ATACGTCACA GGTCAAGGAA CTTTTGATAA CTCTACAGTT GCTGGAATCT TAGAATATGA ACCACCTAAA CAGACCAAAG ATGCTCACTC AAGGACCTCT ATCAAAAATC TCCAACTCTT CAAACCGATA CTCCCTGCTC TAAACGATAC AAATTTTGCT ACCAAGTTTA GCAATAAGCT ACGCAGCCTG AACAGCAAAA ATTTTCCAGC AAACGTGCCT CTGAATATTG ATCGAAAGTT CTTCTTCACA GTAGGATTGG GAACAAACCC GTGCAATCAT AAGAATAACC AGACATGCCA GGGTCCTACT AACACCACAA TGTTTGCTGC CTCAATCAGT AACATTTCCT TCATAATGCC AACAAAAGCT CTCCTTCAAT CTCACTATTC TGGGCAATCT CATGGAGTTT ATTCCCCAAA ATTTCCATGG AGTCCCATTG TCCCATTTAA CTACACAGGC ACTCCACCTA ACAATACCAT GATTAGCAAC GGTACAAACT TGATGGTTCT ACCTTATAAC ACCAGTGTGG AGCTGGTGAT GCAAGACACT AGCATTCTTG GTGCAGAAAG CCATCCTCTT CATCTTCATG GGTTCAACTT CTTTGTGGTT GGCCAAGGCT TTGGGAATTT CGACCCGAAC AAGGATCCTA AAAACTTCAA CCTTGTTGAC CCAATAGAGA GGAACACAAT CGGTGTGCCA TCTGGTGGAT GGGCTGCTAT TCGATTCCTT GCAGATAACC CAGGAGTGTG GTTCATGCAC TGTCACTTGG AAGTACATAC CAGTTGGGGT CTGAGGATGG CTTGGCTTGT TCTTGATGGA GATAAACCTG ATCAGAAACT TCTTCCTCCT CCTGCAGACT TGCCCAAATG CTGAGAATTC TTTCCCCATG ATTCAAGTCC TTTTTCTTTT TGTTTCTTGT CTCTTCTTTC TTACAAGATT CGCCGCATTT TTTTCGTTTT TTTCCCCGGC CATTTATCGG TGGACATGAG GTCAATACCT GTTTAATAAT TTGACATGAG GTCAATTTCT TTACAATTAT TTACTGTTGC ACAGCTCTGT TTTCTGCAAG TGTAGATCTA TGTAAACCCA AAACTAATAT ATATATACA 
Length2009
Protein Sequence
Protein Residue
Map Locationscaffold_8: 18172522.. 18174955
Download Sequence
A.thaliana
AGI-codeAT5G60020.1
Descriptionlaccase 17
TAIR curator summaryputative laccase, a member of laccase family of genes (17 members in Arabidopsis).
Alias[ATLAC17][LAC17][laccase 17]
Gene coexpression
MR
MR Locus Description
27.8209 Ahg494383 GDSL-like Lipase/Acylhydrolase superfamily protein
42.7083 Ahg491950 expansin B3
43.6119 Ahg495659 FASCICLIN-like arabinogalactan 1
45.6618 Ahg919156 Pectin lyase-like superfamily protein
57.3585 Ahg494417 GDSL-like Lipase/Acylhydrolase superfamily protein
59.7913 Ahg482815 Laccase/Diphenol oxidase family protein
61.1882 Ahg484503 Cupredoxin superfamily protein
61.2862 Ahg487235 3-ketoacyl-CoA synthase 19
67.1714 Ahg479245 Leucine-rich repeat (LRR) family protein
67.3498 Ahg926334 CYCLIN D1;1
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression