| Annotation |
|---|
| Description | jgi|Araly1|496421|fgenesh2_kg.8__2237__AT5G62440.1 |
| Sequence |
CCTAAAGCTT AAACCCTAGA AATCGTAAGG CGAAAGCTTG ACTGGTTTAT CAATGGCGGA GCAACAAGAG ATCCTCGATT CCGTTTCAGC TCAAGTGAAC CCAGACCAGA AAGTTGACAT GGAGGTCGAA GCCGTGGCCC CAAAAGCCGA GACCGGCGAT GAGAAACGTG AGAGAGAGGA GACAGAGGAA GAAGAGAACG GAGGTGAATC GAAGAAGCAG AAGGTGGCAG AGGAAGAGAA GTCAGGTCCG GTTAAACTTG GTCCGAAGGA GTTTGTTACC TCTGTGGCGA TGTTCGATTA CTTTGTCAAG TTTTTGCACT TTTGGCCAAC TGATCTCGAT GTTAATAAGT ATGAGCACAT GGTGCTGCTA GATCTGATCA AGAAGGGCCA CTCTGAGCCT GAAAAGAAGA TTGGAGGAGG AATCAAAACC TTCCAAGTCA GAACCCACCC AATGTGGAAA AGCCGATGCT TCTTTCTGGT TAGGGAAGAC GATACTGCAG ACGATTTCAG CTTCAGGAAG TGTGTTGATC ACATCCTTCC ATTGCCTGAA AACATGAAGA GTCCTGGAGC TAATGGCAAT GGACATGGCG GTGGTGGTCG TGGTGGCGGT GGTGGAAGAA GAGGTGGCCG TGGTGGTGGT AGAGGCGGGA GATTCAGAAG ATGAATTTGC TGACACTTGA TACCTTATTT CAAAAGAAAA TTTTGAAAAT TTCAGATTTT TGTCAGTTTA TATGACCTAT TATTGCTG |
| Length | 748 |
| Protein Sequence | |
| Protein Residue | |
| Map Location | scaffold_8: 19261254.. 19262827 |
| Download Sequence |
|
| A.thaliana |
|---|
| AGI-code | AT5G62440.1 |
| Description | Protein of unknown function (DUF3223) |
| TAIR curator summary | Encodes a protein DOMINO1 that belongs to a plant-specific gene family sharing a common motif present in the tomato DEFECTIVE CHLOROPLASTS AND LEAVES (LeDCL) protein. DOMINO1 is located in the nucleus. Arabidopsis embryos carrying the domino1 mutation grow slowly in comparison with wild type embryos and reach only the globular stage at desiccation. The primary defect of the mutation at the cellular level is the large size of the nucleolus that can be observed soon after fertilization in the nuclei of both the embryo and the endosperm. DOMINO1 might have a role in ribosome biogenesis and in determining the rate of cell division. |
| Alias | |
| Gene coexpression |
|---|
| MR |
| MR | Locus | Description |
| 6.245 |
Ahg933903 | heat shock protein 60-2 |
| 7.87401 |
Ahg490061 | Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein |
| 8.06226 |
Ahg492249 | FtsJ-like methyltransferase family protein |
| 9.79796 |
Ahg945215 | |
| 10.583 |
Ahg491807 | arginine methyltransferase 11 |
| 11.6189 |
Ahg477335 | Ribosomal protein L13 family protein |
| 17.7764 |
Ahg477645 | H/ACA ribonucleoprotein complex, subunit Gar1/Naf1 protein |
| 18.5742 |
Ahg485282 | Pentatricopeptide repeat (PPR) superfamily protein |
| 20.199 |
Ahg490186 | Transducin/WD40 repeat-like superfamily protein |
| 20.445 |
Ahg940076 | Ribosomal protein S8e family protein |
|
| RNA-seq |
|---|
Seasonal expression (July 2011 to June 2013) |
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| The four seasons |
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| Growth Chamber expression |
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