Detail



ID : Ahg496435

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|496435|fgenesh2_kg.8__2251__AT5G62560.1
Sequence
TTTTTAGCTC GGAGCCGCTT CTTCTTCATC TTCTTCCTCC TCTCAAAAAC CTAATTTTTC CTCCGATGGG TGGAAATAAG CAGAGATGGT TCTCTTTCCA CCAACGATCC TCATCCGCCA CCACTACAAC TATACCACAG CACAAACACG ACGAGACTCC ACCGGAGTTT CTTTGCCCCA TCACCGGATT CCTCATGTCG GATCCTGTAG TCGTCTCTTC CGGTCAAACC TTCGAGCGTC TCTCTGTTCA AGTCTGTCGT AACTTAGGGT ATGTACCGGA TCTCCTAGAC GGTACCCGAC CCGATCTCTC CACCGTCATC CCCAATCTCG CCATGAAATC CACCATTTTC AGCTGGTGCG ACCGGAAAAA AGTTGACCAT CCTCGTCCTC CTGATTCCGC TTACGTCGAA GGCGTGGTTC GTGCCCGAAT GGATAAAGAT CCGAATCCGA GTCCGACTCC GAGTCAAAGC CCGGGTCTGG ATACTACGAC TCCGGAGTCT GAGATTCTCC CTCCTGTAGA AGAGGATTCA CCTTCGGATT ACGATGCTGT GATGGAAGCG ATTCGAGCTC GATCGAAGAA TTCAATGTCG CCGACGACGT CTCTTGAATC GGTGACGATT GGTCAGAGTC CGTATCACCC GGTTCGAGCC GTTAGTATGT TCTCTTCTTC AACTAATTCT TCTTCCTCTG GAGTTTTCGC TGGAGCTGAT AGTCCATTTC GAAACGCTAT CTCTTTCTCT TCCTCCGATC ACTCTTCTTC TCCGATGTCG CCGGAAGAAG AAGAGATCTT CAACAAATTG AGAGGTACCG ACATTTTCGA CCACGAGCAA GGTTTGATTC TTCTTAGGAA GATGACGAGA TCTGGTGAAG ATCTTAGGGT TTCGCTTTGT ACAGATCGGA TTCTCTCTTT TCTCCGATCA CTGCTTGTTT CACGGTACAA TATTGTGCAG ACAAACGCCG CCGCGTCGCT GGTTAATCTC TCGCTGGAGA AACAGAACAA AGTTAAGATC GTGCGGTCAG GATTTGTTCC TCTGTTGATC GACGTTTTGA AATCGGGAAC GACGGAGGCG CAGGAACATG TCGCCGGAGC TTTGTTTAGT TTGGCGTTGG AAGATGAGAA CAAAATGGTT ATCGGAGTTC TCGGTGCGGT TGAGCCGCTT CTTCATGCGC TGCGTTCATC GGAGAGTGAA AGAGCGCGTC AAGACGCAGC TCTTGCGCTT TATCATTTGT CGCTTATTCC GAGCAACCGA ACAAGGCTGG TTAGAGCTGG TGCGGTGCCA ACTCTGCTTT CGATGGTAAG ATCCGGCGAT TCGACTAGCC GAATTTTGCT AGTACTTTGT AACCTTGCGG CTTGTCCAGA CGGAAAAGGC GCGATGCTAG ACGGAAATGC GGTGGCGATT CTGGTAGGGA AGCTCAGAGA AGTCGGAGGT GGTGATTCCG AGGCGGCGCG TGAGAACTGT GTGGCGGTTC TGTTGACGTT GTGTCAAGGG AATTTGAGGT TTAGGGGGTT AGCGAGCGAG GCGGGAGCGG AGGAAGTGTT GATGGAAGTG GAAAAGAATG GGAATGAACG GGTGAAGGAG AAGGCGTCGA AGATTCTGCA GGCGATGAGA GGAGGAGGCG GAGGAGAGAG TGAGTATGGG GAAAATGCGG AGGCGCGTGA CTGGAACCGT ATGCTTGAAG CGACTGGGCT AAGTCGGACT CAGTTTCAAG GAGGGCAAAA TGGAGGTTTT GCTTATTCCT CCCAGTTCTA GCTTTTTTTT TTTAGTTGTT TATTTTTTAA TGTTTTCTTA TTTTACCTTT TTCTGTTTGA TATAAATGGG TGTAAATTAT TAATTTTGTG TGAATTGTAA TATGTGATTA TTGTTTTTTT TTC 
Length1873
Protein Sequence
Protein Residue
Map Locationscaffold_8: 19294150.. 19296053
Download Sequence
A.thaliana
AGI-codeAT5G62560.1
DescriptionRING/U-box superfamily protein with ARM repeat domain
TAIR curator summary
Alias
Gene coexpression
MR
MR Locus Description
1 Ahg473842 RING/U-box superfamily protein
4.89898 Ahg926748 ETHYLENE-INSENSITIVE3-like 3
5.83095 Ahg480687 cold shock domain protein 3
9.53939 Ahg343889 Leucine-rich repeat protein kinase family protein
13.2665 Ahg474175 hexokinase-like 1
25.923 Ahg496596 TRICHOME BIREFRINGENCE-LIKE 14
28.1425 Ahg929511 phospholipase D P1
29.4109 Ahg311407 Beige/BEACH domain ;WD domain, G-beta repeat protein
37.3497 Ahg482225 proline-rich family protein
46.7226 Ahg358061 Tetratricopeptide repeat (TPR)-like superfamily protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression