Detail



ID : Ahg496509

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|496509|fgenesh2_kg.8__2325__AT5G63260.1
Sequence
TGATTTGATC TTCTCTTCTC GGTTGAAATT AGGGATTTCT GTAAAATTGT AATGTGATTT TGAGTAAATC ATGAGCAAGC CCGAAGATAT TTCCGACCCG AATCCAACCG GACCCGATCC GTCTCGATCT TCCTCCGATG AGGTCACCGT CACCGTCGCC GATCAGGCTC CGTCTGATCT CAATCACGTT TCTGAGGAGC TAAGTGATCA ATTCAGGAAT GTGGCTTTGG ATGATTCTGC GAAAGAGCTG AGTGTTCCGA TTAGTGTCAA TGTAGAAACG GATTCGAGGG CATTAGGCAG CGATCAAAAG GAGGAAGAAG AGCGTGAGAG TATGATTGAG AAGAGAATGA TGGTGGTGTA TCCAGTGAGA CCTGACGCAG AGGATTGTTC GTTTTATATG AGAACAGGAA GCTGCAAATA CGGATCAAGT TGCAAGTTCA ATCACCCTCT TCGAAGGAAA CTTCAAATTG GTAGGGAGAA AGTAAGGGAA AGAGACGAGG ATGTGGAGAA TCCAAAGCTG ATGGAGTGTA AGTACTACTT CAGGACTGGA GGGTGCAAAT ATGGAGAGTC TTGTAGATTC AGCCACATGA AAGAACATAC TTCTCTGGCC TCAGGACCAG AGCTTAACTT CCTTGGCCTT CCTATCAGAC CGGGAGAGAA AGAATGCCTT TTCTACATGC GCAATGGCTC CTGCAAGTTT GGATCTGACT GCAAATTTAA TCATCCTGAC CCTACGGCTA TCGGAGGAGT TGATTCTCCC TTGTTCCGTG GTAATAACGG TGGACCCTTT TCCCCAAAGG CCCCATCCCA AGCAAGTTCA ACTTCTTGGT CTTCAACGAG ACATATGAAT GGTACTGGTA CTGCTCCTTT TATTCCAGCC ATGTTCCCCC ATAATCGTGG AGTTTCACCT CAAGCTCCAG AGTGGAATGG GTATCAGGCG TCTTCTGCCT ATCCACCAGA AAGGAGTGTG CTTGCTCCTT CCACATACCC CGTGAACAAT TCATTGGCTG AAACTAGTTC ATTCTCACAA TACCAACACC AGATGCCTGG TGAGGAATTC CCAGAACGCC CGGATCAACC AGAGTGCACT TATTATCTTA AAACTGGGGA CTGTAAGTTC AAATATAAAT GCAAATACCA TCATCCGAAA AATAGATTGC CAAAGCAAGC TCCATTCTCT TTCAATGACA AGGGCTTGCC CCTAAGACCT GATCAGAGTA TGTGCACACA CTACAGCCGA TATGGCATCT GCAAATTTGG TCCAGCTTGT AGATTTGATC ATTCCATACC GCCTACATTC TCGCCCAGTA GCTCCCAAAC CGTAGAAGCT CCTCAAGTTG GAGCTAACGG AAATGAAGAT GACAGCTGGC ATTGACATCA CATGTTCAGA AGCCTGCGTA AGGGATACTT TTTTTCTTTA CCATCATAGG CTTTTCAGTT TTTAGGATCA AACTCTTCTT TTGGCTTTGG AGTTTATAAA AACATTTAGG TAAATTATAG TCTCCAAACT ACATCTATCT GGCAAGTCTG ATGCTTGTTT ACAGAATTCT CACACAATAA CTTTTCTCTC CCGCTTTAAC TGTAACTATC TACTCTTTCA CTAAGGTTCA GTCTAATGGA AGCATGTTCT GTTT 
Length1634
Protein Sequence
Protein Residue
Map Locationscaffold_8: 19646076.. 19648878
Download Sequence
A.thaliana
AGI-codeAT5G63260.2
DescriptionZinc finger C-x8-C-x5-C-x3-H type family protein
TAIR curator summary
Alias
Gene coexpression
MR
MR Locus Description
2 Ahg479740 Topoisomerase II-associated protein PAT1
2.64575 Ahg470794 endomembrane-type CA-ATPase 4
3.4641 Ahg934985 Heat shock protein DnaJ with tetratricopeptide repeat
4 Ahg478180
11.4018 Ahg928482 rhomboid protein-related
13.2665 Ahg898575 PAP/OAS1 substrate-binding domain superfamily
16.7332 Ahg488158 no exine formation 1
20.3961 Ahg926218 Nuclear transport factor 2 (NTF2) family protein with RNA binding (RRM-RBD-RNP motifs) domain
21.0713 Ahg490436
21.7256 Ahg923937 regulatory particle triple-A 1A
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression