Detail



ID : Ahg496765

Blast(Query) A.halleri   /   A.thaliana (NOT RECIPROCAL)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|496765|fgenesh2_kg.8__2581__AT5G65310.1
Sequence
TCTCTCTCCC TCTCCCTATC TATCTCTCTC TTACAAATTT CGATTTCTCG GGGGATAAAT ATTAGACTTT TGAAATCTCT ATCGCTAATA CTTCCCGAGA AAACCTGATG AATTAAAAGT TCATATTTTA TTAGTCAATT CTCTATTTCC ATCTTATATG GATAGTGTAG ACACAGAGCA AAGATCCTTC TTTGGAGAAA AACAAGATGA GAGACGAGAG AGGATCGTTT CTTCACGTAT TGGTCGTAGG TAGATCTGAA TCGATAACGA TATAGCTAGG CCTTGATCTA ACCATTATAT ATAAACTTCA TTTCTTCTCA AGTAATTTTC AATCCCTATA GTTCCGACCA AACAAGATGA AGAGGTCACG TGGAAGCTCC GATTCTTTAG CCGGTTTCTT ACCAATTCGC CATTCTACAA CAGACAAACA AATAAGTCCA AGACCAACAA CCACTGGCTT TCTCTATTCC GGCGCCGGAG ACTACTCGCA GATGTTCGAC GCATTAGAAG ACGACGGAAG TCTAGAAGAC ATCGGCGGTG TTGGACACGC GTCTTCTACG GCGGCGGAGA AAAAACGGCG GTTGGGTGTA GAGCAAGTGA AAGCGTTAGA GAAGAATTTT GAGATTGATA ACAAGTTAGA GCCAGAAAGG AAAGTGAAGC TGGCCCAAGA GCTTGGGTTG CAGCCGCGTC AAGTGGCGAT CTGGTTTCAG AACCGCCGTG CTCGGTGGAA GACAAAACAG CTTGAACGTG ATTATGGCGT TCTTAAGTCA AACTTTGATG CACTCAAACG CAGCCGCGAC TCGCTTCAAC GCGATAACGA TTCCCTCCTT GGACAGATTA AAGAGCTGAA AACAAAACTT AACGTGGAAG GGGTTAAAGG TATAGAAGAG AACGGCGTTG AAAAAGCCAT GGAAGCAAAT CAGGCGGTGA TGGCTAGTAA TGAAGTCTTA GAGCTAAACC ACCGTCCTCC GCCGCCGCCA ACGCATATTC CTACTGAAGA TCCGACATCG GAGCTCGCAT ACGAAATGTT TAGCATTTTT CCACGCACCG AAAACTTCAG AGAAGATCCT GCCGATAGCA GCGACGACTC AAGTGCGGTT TTGAACGAAG AGTATAGTCC CACAACCGTT GAAGCAGCGG GCACGGTGGC GGCCACGGCG GTTGAAATGT CGACGATGGG TTGTTTTAGC CAATTCGTGA AGATGGAAGA GCATGAAGAT CTGTTTAGTG GAGAGGAAGC TTGCAAGTTG TTTGCGGACA ATGAGCAATG GTATTGCTCC GATCAGTGGA ATTCGTAAAA TGTGGGGGCA GAATTGAAAG GGTAGGAAAA TCAATTACCC AAAATGTTGG GGTTTTAGTT GAGAAAAGGG AAAATGACGC GAGAGTGTAG TTCCATGCAC GTGTGGCCGT AATCTTTCCA AGGTTAAGAG AGGGGACAAA AAAAAAAAAA TTATGTGACA AAGAAATCGT TTTTTCGTCG TTTATAATAT TATTTTGAAT AATTTTACTT AGGTGAATG 
Length1519
Protein Sequence
Protein Residue
Map Locationscaffold_8: 20557844.. 20560119
Download Sequence
A.thaliana
AGI-codeAT5G65310.1
Descriptionhomeobox protein 5
TAIR curator summaryEncodes a class I HDZip (homeodomain-leucine zipper) protein that is a positive regulator of ABA-responsiveness, mediating the inhibitory effect of ABA on growth during seedling establishment.
Alias[ATHB-5][ATHB5][HB5][homeobox protein 5]
Gene coexpression
MR
MR Locus Description
2 Ahg930275 Plant protein of unknown function (DUF828) with plant pleckstrin homology-like region
8.06226 Ahg472068 Pentatricopeptide repeat (PPR) superfamily protein
10.583 Ahg890555 phosphatidylserine decarboxylase 1
11.6189 Ahg497283 Protein of unknown function (DUF740)
21.9089 Ahg909112 Pentatricopeptide repeat (PPR) superfamily protein
27.9285 Ahg486231
29.4618 Ahg487509 Leucine-rich repeat receptor-like protein kinase family protein
35.1568 Ahg477994 Pectin lyase-like superfamily protein
36.4143 Ahg487746 phosphatidylinositol 4-OH kinase beta2
36.4692 Ahg478905 Plant protein of unknown function (DUF641)
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression