Detail



ID : Ahg496809

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|496809|fgenesh2_kg.8__2625__AT5G65730.1
Sequence
ATGGCTAAGA TATGTTCCCC TTCTTTTCCC GATACTCCCT TTCTTTACAT TTTCACTCTC TTTACAGTAA TGTTCATTCG GATTTCCGCT CGGCCCGCGA CATTCGTCGA TGATTTCAAA GCCGCGTGGT CGGAATCTCA CATCCGTCAA ATGGACGGTG GAAAAGCTAT CCAGCTCGTC CTTGATCAGA GCACTGGATG TGGATTTGCT TCCAAAAGAA AGTATTTATT CGGACGAGTG AGCATGAAGA TCAAACTCAT TCCAGGAGAC TCTGCCGGTA CGGTCACCGC TTTCTACATG AACTCCGATA CGGCCACGGT GAGAGACGAG CTAGATTTCG AGTTCTTGGG AAACAGAAGT GGTCAACCTT ACTCAGTGCA AACAAACATA TTTGCTCATG GCAAAGGAGA TAGAGAACAA AGAGTTAATC TTTGGTTCGA CCCATCTTTG GATTACCACA CTTACACTAT CTTATGGTCA CACAAACACA TTGTTTTTTA CGTAGACGAT GTGCCAATAA GAGAATACAA AAACAACGAA GCCAAGAACA TTGCTTACCC AACATCACAA CCTATGGGAG TTTACTCAAC ATTATGGGAA GCCGATGACT GGGCGACACG TGGCGGATTA GAGAAAATTG ATTGGAGCAA AGCTCCGTTT TATGCTTATT ACAAAGATTT CGACATCGAA GGTTGTCCTG TTCCTGGACC AACCTTTTGT CCATCGAACC CTCACAATTG GTGGGAAGGT TATGCCTATC AGTCTCTTAA CGCCCTCGAA GCTCGACGTT ACCGGTGGGT TAGAGTAAAC CATATGGTTT ATGATTATTG TACCGACCGG TCTAGGTTTC CTGTCCCACC ACCCGAGTGT CGTGCTTGAA AATAATTCCA TATATACGTA CGTTACAATG ATCATGTTTC GTCTTGTACG ATATTTTATA TATATATTAA TTGTGGGAAA ATGTGGATTG TATTGTCCTC TTATGCAATT GTGCAGACGT ACGTGAGTAT ATATAGATAT AATTGTGATT TGTGGTTATT TGAAAATTT 
Length1049
Protein Sequence
Protein Residue
Map Locationscaffold_8: 20788706.. 20790078
Download Sequence
A.thaliana
AGI-codeAT5G65730.1
Descriptionxyloglucan endotransglucosylase/hydrolase 6
TAIR curator summary
Alias[XTH6][xyloglucan endotransglucosylase/hydrolase 6]
Gene coexpression
MR
MR Locus Description
6 Ahg470362 FASCICLIN-like arabinoogalactan 9
6.16441 Ahg496502 Pectin lyase-like superfamily protein
6.48074 Ahg473169 GDSL-like Lipase/Acylhydrolase superfamily protein
8.3666 Ahg484671 expansin A5
10.9545 Ahg948737 HAD superfamily, subfamily IIIB acid phosphatase
16.0935 Ahg497154 FASCICLIN-like arabinogalactan 2
17.9444 Ahg483330 Basic-leucine zipper (bZIP) transcription factor family protein
20.5913 Ahg480225 xyloglucan endotransglucosylase/hydrolase 4
21.2132 Ahg480276 Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein
22.2486 Ahg486262 Basic-leucine zipper (bZIP) transcription factor family protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression