Detail



ID : Ahg887485

Blast(Query) A.halleri   /   A.thaliana (NOT RECIPROCAL)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|887485|Al_scaffold_0060_2
Sequence
ATGGAGAGGT ATGAGATAGT GAAGGATATT GGGTCTGGTA ATTTCGGAGT AGCAAAGCTT GTTCGTGAGA AATTTTCCAA AGAGCTTTTC GCTATTAAGT TCATCGAGAG AGGCCAAAAG ATTGATGAAC ATGTACAAAG AGAAATCATG AATCACAGAT CACTCATCCA TCCCAATATA ATAAGATTCA AGGAGGTTTT GTTGACGGCA ACACATTTGG CGCTAGTAAT GGAATACGCC GCCGGAGGAG AACTGTTCGG AAGAATCTGC AGCGCCGGAA GATTCAGTGA AGACGAGGCA AGGTTTTTCT TTCAGCAGCT TATATCAGGA GTTAATTACT GTCACAGTCT TCAAATATGC CATAGAGATT TAAAGCTAGA GAACACTTTG TTGGATGGAA GTGAAGCGCC GCGCGTAAAG ATTTACGACT TCGGATATTC AAAATCAGGA GTTCTTCATT CGCAACCAAA GACCACTGTA GGAACACCTG CTTACATTGC GCCTGAAGTG CTCTCCAAGA AAGAGTATGA CGGCAAAATC GCTGATGTTT GGTCTTGTGG AGTCACTTTG TATGTCATGC TTGTTGGTGC TTATCCTTTT GAAGATCCTT CTGATCCTAA AGATTTTCGG AAAACCATCG GTCGGATTCT CAAAGCTCAG TATTCTATTC CTGATTATGT TCGAGTTTCG GATGAATGCA GACATCTTCT CTCTCGGATA TTCATTGCCA ACCCTGAAAA GAGAGTAAGG ATAGAGGAGA TAAAGAATCA TTCTTGGTTT CTCAAGAATT TGCCGATGTC TGAAGGATCA TTGATGATGA ATGGTCCATC GACTCAAACA GTGGAAGAGA TAGTGTGGAT CATTGAGGAA GCTCGGAAAC CGATCACAGT AGCTACTGGA CTCTCCGGTG CTGGTGTCTC TGGTGGAAGC AGTAATGGTG CCATTGGAAG TACCAGTATG GATCTCGATG ACTTGGACAC TGATTTCGAC GACATCGATA CCGCTGATCT CCTTTCCCCT ATGTGA 
Length1026
Protein Sequence
Protein Residue
Map Locationscaffold_2: 17108568.. 17110040
Download Sequence
A.thaliana
AGI-codeAT1G78290.2
DescriptionProtein kinase superfamily protein
TAIR curator summary
Alias[SNRK2-8][SNRK2.8][SRK2C][SNF1-RELATED PROTEIN KINASE 2-8][SNF1-RELATED PROTEIN KINASE 2.8][SNF1-RELATED PROTEIN KINASE 2C]
Gene coexpression
MR
MR Locus Description
12.1655 Ahg939527 Aldolase-type TIM barrel family protein
28.2843 Ahg479981 FTSH protease 9
30.3974 Ahg477656 alpha/beta-Hydrolases superfamily protein
33.7639 Ahg479430 presequence protease 1
36.0555 Ahg491603 Protein kinase superfamily protein
37.1349 Ahg914489 SPA1-related 4
40 Ahg944194 RUB1 conjugating enzyme 1
51.5558 Ahg496704 general control non-repressible 5
52.7731 Ahg479910 Protein kinase superfamily protein
59.6992 Virus3865
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression