Detail



ID : Ahg887505

Blast(Query) A.halleri   /   A.thaliana (NOT RECIPROCAL)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|887505|Al_scaffold_0066_3
Sequence
ATGAACATCT TCAAGAAGAA GACCACTCCC AAAGATGCTC TTCGTACCAG TAAGAGAGAA ATGGCTGTGG CTACACGAGG TATCGAACGG GAGATTACAT CTCTTCAACT AGAGGAGAAG AGACTAGTTG CAGAGATCAA GAAAACAGCT AAGACTGGAA ATGAGGCTGC CACAAAGATT TTAGCTCGTC AACTTGTTCG ATTGAGGCAA CAGATTACCA ACTTACAGGG AAGTCGTGCT CAGATTAGGG GTGTGACGAC TCATACACAG GCTCTGTATG CCAGCACTTC GATATCATCT GGCATGAAAG GTGCTACCAA AGCTATGGTT GCAATGAACA AGCAAATGGC ACCCACTAAA CAAGCCAAGG TGATTAAGGA TTTCCAGAAG CAGTCGGCAC AGCTAGACAT GACGATAGAG ATGATGTCAG AGGCAATTGA TGAAACACTT GACAAAGATG AGGCTGAAGA AGAAACAGAA GATCTCACTA ACCAAGTTCT TGATGAGATT GGTGTTGGTG TTGCATCTCA GTTATCTTCA GCTCCTAAAG GCCGGATTGC TACAAAAACC GCAGCTCCTC CCGCTTCCAC TGCAGCAACT AAAAACAACA ACTCTGAATC AAGTGAAGTG GATGAGCTTG AGAAGAGGTT GGCTTCGCTT CGACGAATCT GA 
Length672
Protein Sequence
Protein Residue
Map Locationscaffold_66: 14249.. 16689
Download Sequence
A.thaliana
AGI-codeAT5G44560.1
DescriptionSNF7 family protein
TAIR curator summary
Alias[VPS2.2]
Gene coexpression
MR
MR Locus Description
15.4919 Ahg482818 glycerol-3-phosphate acyltransferase 6
21.8174 Ahg470351 targeting protein for XKLP2
40.6202 Ahg477690 Li-tolerant lipase 1
41.0609 Ahg471298 cytochrome P450, family 77, subfamily B, polypeptide 1
44.4522 Ahg920750 Pathogenesis-related thaumatin superfamily protein
48.4974 Ahg917240
48.8672 Ahg941774
50.6063 Ahg903003
54.6535 Ahg929937 Kinesin motor family protein
55.2721 Ahg927503 Leucine-rich repeat (LRR) family protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression