Detail



ID : Ahg887599

Blast(Query) A.halleri   /   A.thaliana (NOT RECIPROCAL)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|887599|Al_scaffold_0052_1
Sequence
ATGGAATCTT CCGTCGCTCC GTTTCCTCAC CGACGCACGC ATCTCTCGAA TCGGACTTAT CGTTCTTTGC TTCATCACCT CTGCTCGAGT TTCGATCGGG AGCCTCGAGT TTCGCTTGCT ACACCGGCCG TTCTTCACGA GCTGGTCTTA AGAACAGAAA TTGCTCCAGT GTCTCCGGGA GAAACTTGCA AACCACCGGA GAATCTATCA ATGGTAGAAT CAAAATCCAA TGGAGTGTCT GTTGATTTAA GAGGTGAGAA TTCGCAGGAA AAGAGTTTGA TGCTTGGAGA TGTTTTTGAT GGAATTGACT TGCAAGATGC ATCTGTTGGT ATTAGACACA CAGATTTTTT CGATAGCTTT GAGCTTATGA TAAATGAAAA TCCAGACTTT GTTCCAGAAA GTTGTGTGAA TCTCTTTGAG GCATTGGATG TGAATGACTA TGATGGTGAT GGTATGGTTG CTTCACTAGA TAATATCGCG AAACAACCGC TTGATTTTGT TCAAAATGTC GTGGAGAAGC CTAATATTTC AACTGAAAGT GATAAAAAGG TAGAGGAGGT TCCTAAATCT GCTGAATCTA ATGAAGTTAA AAGTTCTGGA TTTTTGGAAG CTTGTGATGA AACAGTTCAA AGAGAGATGG AATTGGAGAA ACCTGTTGAT AGTACTCCGG TTTTGGTAGA TTCCGTGTCT CGGATAGTTG AAGATGATGA TGTAGAAGAA GGAGAGATAT CTGGGGATGA TAATGATGAT ATGCTTGTAG AAGATGATGA ACCAGTCGAA AGACATGAGG AGTGTCAGGT CTCACGAGAT GGGATTGGTA ACAGCCATCT CACAAGTCAT GAGAGTTTTG GAAAAGAGCT TGGTGTTGAG AATCTGACTT GTATTTTAAC TTCTTATCTG CAGATGGATC CTGGAACCTC CATTAAAAAA AGGTCTGCGC CTTCTAAGGA CGCAAAAGCC AGAAAGAGGG CAAAAGCTAG GAAGAAAAGA GCTAAAGAGC GTATAGCCCT TGGCGTGAAA AAGCTGAAAC TGAAACCAGT AGCTCCAAAA CCAAAGCCTA TAAAGTATTG TCGACACTAT CTCAAGGAAC GGTGCCATGA GAGTTTCTGC CACAGGGGTG ATATTTGTTT GTTTTCACAC AAGGGTACTC CACAATCTGC TTCAGACACG CCGAGTGCAA ATGTAACAGC CTCATCAACT AACATCACTG CAGCGTCGTT CTCTCCTCAG AAAACAAACA AACAATCCGT GAGAGAGGCA ATAGCCAAAT TACCGGGAAT CCAAGCAAGA GTTTCAAGCT CTGTTGGGTT TTTGAAGCCC TTGAGTCAAT CTAACCATAG AAACCCATCT GATGCATTAT CTCCAAAGAT CAATGAACCT GTAACGCATC CCCAGGTTCT TCCTTTGAGA AAACCATCCG TTGCTCCAAA GGGTATGAGT TTTCTCTCTT TAGACAAAAC CTTCCAAGAG GATACGGTGA AAGTGTCTCC TGCGTCCAAG CGAAACACAG ACAACTCTGA TAATCAGACA TTGAAGCAGT CACAACTGGG AAGCTCTCTT CCTCTGGTGC CTCCAAAAGG AATCAGTTTC TTATCATTTG CATCAGAGGA ACCAAAAACT CTGAATCGAG AGCCTCAAGA ACCATCAAGT AGTAGAAATC TCAAGACAAC TCCTAGCTCA CACATTCAAA GTTCTCTACT CTCAGCAATG AAACTAGCTG CAGAATTCGA ATCCGCTAAA GTTGAAAGAC GGAACAATGA TCCAACAGAA GCTGTAAATA AGAGCAATGT TACTACTGTT AACACGACAG TAACCAGAAA CTCAGGGAAC ATATCTTCCA AGATTCTCGA GTTCTTGTCG AGCTTTAGCC AAGGCAAAAA CTGA 
Length1884
Protein Sequence
Protein Residue
Map Locationscaffold_52: 5291.. 7683
Download Sequence
A.thaliana
AGI-codeAT5G56930.1
DescriptionCCCH-type zinc finger family protein
TAIR curator summary
Alias[EMB1789][embryo defective 1789]
Gene coexpression
MR
MR Locus Description
38.5487 Ahg943447
81.1419 Ahg341959 Octicosapeptide/Phox/Bem1p family protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression