Detail



ID : Ahg889354

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|889354|Al_scaffold_0007_1340
Sequence
ATGGAGACAG ATAGTATGGA GTGCGTCTCG TCTACGGGGA ATGAGATCCA TCAGAACGGT AATGGCCACC AATCTTACCA ATTCTCTTCG ACGAAGACTC ACGGCGGTGC AGCAGCGGCC GCCGTCGTTA CCAATATTGT CGGTCCGACG GCAACTGCTC CGGCCACTAG CGTATATGAG CTTCTGGAGT GCCCTGTCTG TACCTATTCT ATGTATCCTC CTATCCATCA GTGTCATAAT GGACACACAT TGTGCTCGAC CTGTAAAGTG AGGGTGCATA ACAGGTGTCC CACATGTAGA CAAGAACTTG GAGATATTAG ATGTTTAGCT CTTGAGAAAG TAGCCGAGTC CCTTGAGCTG CCTTGCAAGT ATTACAATCT CGGATGCCCT GAGATCTTTC CTTATTACAG CAAACTGAAG CACGAGTCTC TCTGTAACTT CAGACCTTAC AGTTGTCCTT ATGCTGGTTC CGAGTGTGGT ATCGTAGGGG ATATCCCTTT TCTTGTAGCC CATCTCAGGG ATGATCACAA AGTTGACATG CACGCTGGTT CCACTTTTAA CCACCGCTAC GTCAAATCAA ATCCGCGTGA AGTAGAGAAC GCAACTTGGA TGCTAACCGT ATTCCATTGC TTTGGGCAAT ACTTCTGCCT CCATTTTGAA GCATTCCAGC TTGGGATGGG TCCGGTATAC ATGGCCTTCC TGAGATTCAT GGGGGACGAG GAGGACGCAC GGAGCTACAG CTACAGCTTA GAAGTGGGAG GCAGTGGAAG GAAGCTAACA TGGGAAGGAA CCCCAAGAAG CATCAGAGAT AGCCACAGGA AAGTAAGAGA CAGCAACGAC GGTCTCATCA TCCAAAGAAA CATGGCTCTC TTCTTCTCAG GCGGAGACAG GAAAGAGCTT AAACTTAGAG TCACTGGTAA AATCTGGAAA GAGCAACACA GTCCAGATTC TGGACTTTCC ATACCAAACC TATCATCTTC CTGA 
Length984
Protein Sequence
Protein Residue
Map Locationscaffold_7: 5585224.. 5586598
Download Sequence
A.thaliana
AGI-codeAT4G27880.1
DescriptionProtein with RING/U-box and TRAF-like domains
TAIR curator summary
Alias
Gene coexpression
MR
MR Locus Description
3.4641 Ahg478912
4.24264 Ahg492266 C2H2-like zinc finger protein
4.69042 Ahg473468 ubiquitin-specific protease 11
9.79796 Ahg474572
11.4891 Ahg474702 sodium hydrogen exchanger 5
12.2882 Ahg946388 Ca2+ activated outward rectifying K+ channel 6
12.49 Ahg476803 RNA-binding (RRM/RBD/RNP motifs) family protein
14.8324 Ahg492904 Ras-related small GTP-binding family protein
14.9666 Ahg492879 K+ uptake permease 9
19.2873 Ahg948218
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression