Detail



ID : Ahg889986

Blast(Query) A.halleri   /   A.thaliana (NOT RECIPROCAL)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|889986|Al_scaffold_0007_1972
Sequence
ATGGCAGAAA GAGCGATACT TGGGTTTCTG CAGAACAATG AGCAGATCCC GGATTCGGGT CTATTTTCTG CCGAGCACAA CCTTGACCAC GATCAAGTCA AGAATGTCAT CAGAAGGCTC CAGGGTTTTC GTTACATCGA TGCTCAGGAC ATTACTAGGA CGACATGGGT TTTGACTGAA GAAGGGAACA AATATGCTGC ACAAGGATCA CCAGAGGTAC AACTTTTCTT AGCTGTGCCA GAAGAAGGTA GCATATCAGT GAAAAAGCTA GGTGAATCGA TTGACAGATT TGCCTGGAAA TATGCTAAAG AAAACAAGTG GCTGGAATTG GGAGAAAAGC AAGTATCGAG GAAGGTTCAA CATGTAGATG ATATAGTGCA AGCTCTGCTT TTACAGATAC AAGAAGGGAA GGAAATTGAC GAAGACAGTA TCGATTTTCT CAAACGCAGA AAAAATCTCA TAAAACAAGA TAAATGGAAT GGGTATTCTT CCATAAAGAA AGGTCCTAAT TATTCTCCCG AGAGAAAGAA GGTGTCCACC GATTTGACTC GGGAAAATCT ACAAAACTGG AAAGAGCTAG AATTCAAGGA GTATAACTTC AATGCTAAAG GAGCGCCTGT TGAGGCTGGC CTTCTTCACC CTCTTCTCAA GGTGCGGAAG CAGTTTAAAG ACATATTTGT TCAGATGGGG TTTGAGGAAA TGCCAACAAA TAATTTTGTG GAGAGCAGCT TCTGGAATTT TGATGCATTG TTCCAGCCTC AGCAGCACCC TGCTCGTGAT TCTCACGACA CCTTCTTTCT AAAAGCTCCT TGTACGACAA GGACACTTCC AGAAGATTAT GTTGAGAGGG TGAAATGTGT TCATGAGTCT GGTGGATATG GATCAAGAGG GTATAATTGT GATTGGAAGA GAGAAGAAGC AAACAAGAAT CTTCTCCGAA CTCACACAAC AGCCGTCTCT TCTAGGATGC TTTATGCACT AGCACAGAAA CCTTTTGTCC CCAAGAAGTA TTTTTCGATT GATCGTGTGT TCAGAAACGA GGCTGTTGAT CGGACCCATC TGGCAGAGTT CCATCAAATG GAAGGTTTGA TATGTGACCG GGGCCTTACA TTGGGAGACC TGATTGGTGT ACTAAAAGAC TTCTTCTCAC GCCTAGCTGC GGTTCAAGCC AGCGTACAAC CCTTACACAG AACCATGGAG ATCTTCAGCT ACCATGAAAA ATTAAAGAAG TGGGTGGAGA TTGGAAACTC TGGAATGTTC AGACCCGAAA TGCTTCTACC GATGGGTCTC CCTGAGGATG TCCGAGTCAT AGCTTGGGGT CTTGGTCTTG AAAGACCAAC AATGATTTTA TATGGTATCG ACAACATCCG AGATTTGTTT GGACACAAGG TGGATCTCGG TCTCATTAAA CGGAATCCGA TCTGCCGAAT TGGAATCTGA 
Length1440
Protein Sequence
Protein Residue
Map Locationscaffold_7: 8409510.. 8412754
Download Sequence
A.thaliana
AGI-codeAT4G39280.1
Descriptionphenylalanyl-tRNA synthetase, putative / phenylalanine--tRNA ligase, putative
TAIR curator summary
Alias
Gene coexpression
MR
MR Locus Description
35.9444 Ahg893015 RNA-binding (RRM/RBD/RNP motifs) family protein
39.6863 Ahg470343 Cystatin/monellin superfamily protein
44.833 Ahg934962 Galactose oxidase/kelch repeat superfamily protein
47.0956 Ahg330465 myb domain protein 100
57.2538 Ahg942795
87.3499 Ahg339096 DNA repair-recombination protein (RAD50)
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression