Detail



ID : Ahg890114

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|890114|Al_scaffold_0007_2100
Sequence
ATGGAGAGTA ACAACGAGAA GAAGAAAGTT TCAAGACAAT CATCATCCTT CAGACTACGA AGCCCAAGCC TAAACGCACT TCGTCTCCAA CGAATCTTCG ACTTATTCGA CAAAAACGGC GACGGATTCA TTACCGTTGA AGAGCTAAGC CAAGCTCTAT CACGTCTCGG TCTCAACGCT GATCTCTCCG ATCTCAAATC CACCGTTGAA TCCTACATTC AACCTGGTAA CACTGGTCTC AATTTCGACG ATTTCTCTTC TCTTCACAAA ACACTCGACG ATTCTTTCTT CGGTGGAGCT TGTGGAGAAG AAAACGAAGA TTCTTCTTCC CCCGCCGAGG ATGAATCGGA TCTCGCGGAG GCGTTTAAGG TTTTCGATGA GAACGGTGAT GGATTCATCT CCGCTAGGGA ATTGCAAACG GTTCTGAAGA AACTTGGGTT ACCTGAAGGT GGAGAGATGG AGAGAGTGGA GAAGATGATC GTTTCCGTTG ACCGGAATCA AGATGGTCGC GTTGACTTTT TTGAATTCAA GAACATGATG CGTACTGTTG TCATCCCTTC TTCTTGA 
Length567
Protein Sequence
Protein Residue
Map Locationscaffold_7: 8979157.. 8979723
Download Sequence
A.thaliana
AGI-codeAT4G20780.1
Descriptioncalmodulin like 42
TAIR curator summaryCalcium sensor involved in trichome branching.
Alias[CML42][calmodulin like 42]
Gene coexpression
MR
MR Locus Description
16.9706 Ahg951872 glutathione S-transferase TAU 12
29.7489 Ahg493614 PLANT CADMIUM RESISTANCE 2
30.9193 Ahg481516 phospholipase A 2A
31.241 Ahg485812 S-adenosyl-L-methionine-dependent methyltransferases superfamily protein
41.9524 Ahg488005 NADP-malic enzyme 2
51.788 Ahg924051 S-adenosyl-L-methionine-dependent methyltransferases superfamily protein
57.3585 Ahg934929 Calcium-binding EF hand family protein
62.4179 Ahg472349 O-methyltransferase family protein
68.374 Ahg489442 Protein kinase family protein with leucine-rich repeat domain
69.347 Ahg480406 fucosyltransferase 4
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression