Detail


ID : Ahg890140

Blast(Query):  A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|890140|Al_scaffold_0007_2126
Sequence
ATGAAGCATT CAAAGGATCC GTTTGAGGCA GCAATTGAGG AGGAACAAGA GGAATCGCCA CCGGAATCAC CCGTTGGCGG CGGCGGAGGA GGAGGAGGAG GTGATGGTAG TGAAGAGGGA CGAATTGAAA TTGACCAGAC TCAAGAAGAA GATGAGAGGC CTGTGGATGT TCGCCGTCCG ATGAAGAAGG CTAAAACCTC CGTTGTTGTT ACTGAAGCTA AGAACAAAGA TGATGATGAC GAAGAAGAGG AAGAGAACAT GGAAGTTGAG CTCACTAAAT ATCCAACTAG TTCTGATCCT GCTAAAATGG CCAAAATGCA AACCATTTTA TCACAATTCA CTGAGGATCA GATGAGTAGA TATGAATCTT TTAGGAGATC TGCACTTCAA AGACCACAAA TGAAGAAGTT ACTGATAGGT GTCACTGGGA GTCAGAAGAT TGGTATGCCA ATGATTATTG TTGTGTGTGG TATTGCTAAG ATGTTTGTTG GTGAACTTGT GGAAACAGCT CGAGTTGTTA TGGCGGAAAG GAAAGAATCA GGACCTATCA GACCTTGTCA TATCAGGGAG TCCTATCGGA GACTGAAGCT CGAAGGAAAA GTGCCTAAAA GATCAGTTCC ACGGCTCTTC CGCTAG
Length636
Protein Sequence
Protein Residue
Map Locationscaffold_7: 9073133.. 9074027
Download Sequence
A.thaliana
AGI-codeAT4G20280.1
DescriptionTBP-associated factor 11
TAIR curator summaryEncodes TAF11, a putative TBP-associated factor (TBP: TATA binding protein).
Alias[TAF11][TBP-associated factor 11]
Gene coexpression
MR
MR Locus Description
9.32738 Ahg474241 transferases;tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferases
13.0384 Ahg480298 Major facilitator superfamily protein
18.7083 Ahg926497 eukaryotic translation initiation factor SUI1 family protein
21.4243 Ahg318122 S-adenosyl-L-methionine-dependent methyltransferases superfamily protein
28.7228 Ahg488963 TRICHOME BIREFRINGENCE-LIKE 5
30.2985 Ahg488888 Protein of unknown function DUF92, transmembrane
33.3317 Ahg490904 RNA-binding (RRM/RBD/RNP motifs) family protein
42.0357 Ahg326105 DNA repair protein Rad4 family
43.1625 Ahg477446 Bromodomain transcription factor
46.0435 Ahg949533 Protein of Unknown Function (DUF239)
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression