Detail


ID : Ahg892731

Blast(Query):  A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|892731|Al_scaffold_0006_727
Sequence
ATGGTCTTCA AGTATTTTCT ACCATTGCTT TTACTGTCAT TGTTGGTTGC TAATTGTGCC TCAAGGCCAT TGTATCGTCT CCCAAGTGAA GAAAAACATG CTACCAAGAA ACCGCTTCAG ACTTCTCGTC CATATAACCT TGCACACAGA GGATCAAACG GAGAGTTGCC TGAAGAAACT GCTCCTGCAT ATATGAGGGC CATTGAGGAG GGTGCAGATT TCATAGAAAC AGATATTTTA TCTTCCAAAG ACGGTGTACT TATATGTCAC CACGATGTTA ATCTGGATGA TACAACCGAT GTTGCAGACC ATAAGGAGTT TGCAGACCGT AAGAGGACTT ATGAAGTCCA AGGAATGAAC ATGACCGGCT TCTTCACTGT TGATTTTACT CTCAAAGAGC TGAAAACACT TGGTGCAAAG CAGAGGTATC CTTTCAGGGA TCAACAATAC AATGGTAAAT TCCCGATTAT TACCTTCGAC GAGTATATTT CGATAGCATT GGATGCACCT AGAGTAGTTG GGATATATCC AGAGATCAAG AATCCGGTTT TTATAAATCA GCAAGTGAAA TGGGCGGATG GTAAAAAATT TGAAGATAAA TTTGTGGAAA CTTTGGAGAA ATATGGATAC AAAGGCTCAT ATATGTCTGA AGATTGGTTA AAACAGCCAA TATTTATTCA GTCTTTTGCA GCAACTTCGC TAGTTTACAT TTCAAGCATG ACAGACTCAC CAAAATTGTT CTTGATCGAC GATGTCACTA TTCTTACCGA AGACACTAAT AAGACTTACG CAGAGATCAC ATCAGACGCA TATTTGGATT ACATTAAACC ATATGTAATT GGGATTGGTC CATGGAAAGA CACAATTGTT CCTGTGAACA ATAACCGTCT CATGACACCA ACAGATTTAG TTGCGAGAGC ACATTCACGT AATCTTCAGG TCCATCCATA CACATACCGT AATGAGAACC AGTTTCTGCA TTTAGAGTTT AATCAAGACC CTTATCTAGA GTATGATTAT TGGCTCAATA AGATTGGTGT TGATGGTTTG TTCACTGATT TCACTGGAAG TCTACACAAT TACCAGGAAT TGAAGTCTCC TTTGCCTCAG CAACAGTGA
Length1119
Protein Sequence
Protein Residue
Map Locationscaffold_6: 3005681.. 3007293
Download Sequence
A.thaliana
AGI-codeAT5G08030.1
DescriptionPLC-like phosphodiesterases superfamily protein
TAIR curator summary
Alias[AtGDPD6][GDPD6][glycerophosphodiester phosphodiesterase 6]
Gene coexpression
MR
MR Locus Description
7.07107 Ahg472566
9.59166 Ahg920694 Pyridoxal phosphate phosphatase-related protein
10.247 Ahg936924
14.6969 Ahg482655
15.4919 Ahg490949 PQ-loop repeat family protein / transmembrane family protein
16.4317 Ahg931035 monogalactosyldiacylglycerol synthase type C
16.9706 Ahg483646 SPX domain gene 3
18.5203 Ahg930661 Protein of unknown function (DUF506)
19.799 Ahg488950 monogalactosyldiacylglycerol synthase 2
24.3721 Ahg476431 phosphate starvation-induced gene 2
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression