Detail



ID : Ahg893671

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|893671|Al_scaffold_0006_1667
Sequence
ATGAGAACCG TATCATATGT ATCAGATCTT CATATAAACG TAAAGGGTGT TCCATTTCAT CTTTGCAAAG AAATGTTAGC AAAGAGATCG TCGAAAGTGA GCTCATTACT CGAGCGAAAC GAGATCGATG AGCTGCGTTT GATCCTACGA GATTTAGAAG TCGATCCAGA AACCTTTGAG CTCGTTGAAA GATTTTGTAA TGGCTGTGAA TTCAAGTTTA CGTCTGATAC CATCGTCTCT GTTCTCTGCA TCGCGTATTA CTTAGGGATG AATGAAGAAC AAAGCTCTAA TAACTTGTTG GGTAAGGCAT CTGAGTTCCT AGAGCAACGA GTTTTACCGA GCTGGAGTGA GACTGTAAAT GCTCTTCGTT CAGGGGACAA GAGTTTCGAC AAGCTAACTG ATGTTGGACT CGTTGATCTC TTCTTTGATT CCCTTATCGA AAAAGCCTCC TACGATCCAA GACTCCTTGG TGAACTGATC AAGAACAGAG TGGAAACCGA TGATTATAGA CCTAACCCTA GGAGACGATT GTTTGTTATA GATTGGAAAT CGGAAGATCT GATCACAATT CCACTTCGGT TATATGAACC TTTGATGATC CGAGCAATTA AATCCCGCAG CATTCCCGTG GAATACATCG TTTTATCGGT CTGTAAATAC GCGAAGAAAT GGGTTTTCGA TGCAGAAGAA AGCCTTTCAG GGCAAAAGAG AGAAGCAATT GAAGCGGTTG AGCGGCTTTT GCCACATCAG AGGGGGCTAA TCTCTTGTGA ACTCTTATTC GAATCGCTAA AGCATTCGAT CTGGTTAGAA GCCAACTCCG AATGTCGAAA TGGATTCATG ATCAGAATCT GCAAGCAACT CGACATGGCT AAATCAACAG ATCTCAAGAT TCTATCCCGA GGATACGGAG AAAAAGCTGA GGGTTACGAA AATATCGAGC TCGTTAAAAC CGTCGTAAAG AGCTTTTACA CTTACTACGC CAATGAAGAC TCTGAAAATG TTTCACATTT CGTGAAAGTA GCAAAACTGT CGGAAGAATT TCTGTTCTTG GCTGCGAGTG AGGCTTCTCT GAAGCTCGAG GCGTTTGTGG AGTTAGCAGA GATGACAGTG GCAATTTCGC AAGGTATTTT GAGCTACTCA GATGGGATTT ACAGAGGCAT TGATGAATTC TTGGACAGCC ACAGATACTT AACTGAATCA GAGAAGATGG AAGTTTGTAA AGTTCTTGAA TATAGTAAAC TCTCTCAAGA AGGATGCGAG CGAGCCGCGA GAAACCAGAA GCTTCCTGTT AGAATCGTTG TTCAAGTTTT GTTTGTTTCT CAGCTTCAGA TACGTGATAC AGTGGCTAAA GAGATTAAGG GTATGGAAGA GAAAGTAGAT GAAGAAGAAG AAGAGATTGG GGTTTCGAGC GATGAAGATG AGATGGAGAA GATGAGTAAT AAGCTGTTAG GACTTGAGAT TAAGAATGAT GAATGTGTTG TTCATCGTTG GAAGAAGACG AAGAAGAAGA AGATAAGTGT GTGGGGACAA GTGAAGAGGA AGTTTGGTTG CTTGACTTCT TCTTCTTATT CAGTTGATGC TTGCACCTGT GATGTCAAGA AGAAGAAGAA GAAGAAGATT CATCATCATC ACTACAAATA A 
Length1641
Protein Sequence
Protein Residue
Map Locationscaffold_6: 6922185.. 6923885
Download Sequence
A.thaliana
AGI-codeAT5G17580.1
DescriptionPhototropic-responsive NPH3 family protein
TAIR curator summary
Alias
Gene coexpression
MR
MR Locus Description
6.85565 Ahg336484 Glyceraldehyde-3-phosphate dehydrogenase-like family protein
46.9042 Ahg898914 Plant regulator RWP-RK family protein
63.8279 Ahg944000 alpha/beta-Hydrolases superfamily protein
76.7333 Ahg478769 prenylated RAB acceptor 1.F4
79.2212 Ahg478246 DHHC-type zinc finger family protein
81.3757 Ahg485555 basic leucine zipper 24
82.0122 Ahg496280 glucuronidase 1
91.5096 Ahg902678
97.857 Ahg475816 F-box/RNI-like superfamily protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression