Detail


ID : Ahg894704

Blast(Query):  A.halleri   /   A.thaliana (NOT RECIPROCAL)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|894704|Al_scaffold_0006_2700
Sequence
ATGATGGTGG AGGAGAAAGA AAGAAGCATT GAGGAAAGGC TTTTGCAGCT CAAGAACCAA AACGACGATT CAGATTGTCG TATCACTGCT TGTGTTATCC TTGGTACTTT CGTCGCTGTG TGTGGCTCCT TCTCCTTTGG TGTCTCTCTT GGTTATACTT CAGGTGCTGA GATAGGAATT ATGAAGGACT TGGGTCTTAC AATCGCGCAA TTTTCAGCAT TCGCTTCATT CTCCACTTTG GGAGCTGCAA TTGGTGCTTT GTTTAGCGGT AAAATGGCGA TCATCCTTGG CAGAAGAAAA ACAATGTGGG TCTCCGATCT CCTCTGCATC ATTGGTTGGT TCTCCATCGC TTTCGCTAAG GATGTGATCT GGTTGAACTT CGGAAGAATC TCCTCAGGAA TAGGACTCGG CCTAATTAGC TATGTGGTAC CTGTCTATAT AGCAGAAATT TCCCCAAAAC ATGTTCGTGG TACATTTACC TTTACAAATC AGCTTCTTCA AAACTCTGGA CTCGCCATGG TTTATTTTTC GGGGAATTTT CTCAACTGGA GGAAATTGGC TCTATTAGGT GCTTTACCAT GCTTCATTCA AGTAATCGGT TTATTCTTCG TACCAGAGTC CCCAAGATGG CTGGCAAAAG TTGGTACAGA TAAAGAACTA GAAAATTCAC TGCTTCGGCT TAGAGGGAGA GATGCTGATA TTTCACGTGA AGCCTCAGAC ATTCAAGTAA TGACCAAAAT AGTAGAAAAT GATTCAAAGT CGAGTTTTTG TGATTTGTTT CAGAGAAAGT ATAGATATAC TCTCGTGTTT TCAGGAAGTT CTGCTGTACT CTCTTATGCA AGTACCATTT TAAGAAAAGC TGGTTTTTCG GTGACCGTTG GATCGACACT GCTAGGCCTC TTCATGATAC CAAAAGCCAT GATTGGTGTC ATTCTTGTTG ATAAATGGGG CAGACGGCCT CTCTTGTTGA CTTCTGTATC TGGGATGTGT ATAACTTCCA TGCTTATTGG AGTCGCCTTC ACATTACAGA AAATGCAATT GCTACAAGAA CTAACTCCAG TATTCACGTT TATATGCGTT ACGCTGTATA TTGGAACTTT TGCAATAGGC ATGGGAGGCC TTCCTTGGGT AATTATGTCC GAGATATTTC CAATGAATAT AAAAGTAACA GCAGGAAGTA TAGTTACGTT AGTATCATGG TCAAGTAGTT CGATCGTCAC TTACGCTTTC AACTTTCTGC TCGAGTGGAG CACTCAAGGA ACATTTTACG TATTTGGGGC AACCGGAGGA GTAGCATTGC TTTTTATTTG GTTGCTCGTT CCGGAAACAA AAGGATTGTC ACTTGAAGAA ATACAAGCTT CGCTTATTCG TCAACCTGAC GGAATAAATT AA
Length1392
Protein Sequence
Protein Residue
Map Locationscaffold_6: 12073236.. 12087597
Download Sequence
A.thaliana
AGI-codeAT5G27360.1
DescriptionMajor facilitator superfamily protein
TAIR curator summaryEncodes a sugar-porter family protein that unlike the closely related gene, SFP1, is not induced during leaf senescence.
Alias[SFP2]
Gene coexpression
MR
MR Locus Description
1 Ahg928678
3.4641 Ahg908653 other RNA
3.4641 Ahg339306 DEA(D/H)-box RNA helicase family protein
4.24264 Ahg492125 Phosphatidate cytidylyltransferase family protein
6.48074 Ahg930659
6.63325 Ahg937631
6.9282 Ahg901060 Polynucleotidyl transferase, ribonuclease H-like superfamily protein
9.16515 Ahg894175 myb domain protein 37
9.16515 Ahg924405 ribosomal protein L14
9.59166 Ahg342350
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression