Detail



ID : Ahg895523

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|895523|Al_scaffold_0006_3519
Sequence
ATGGGGAAAT ACTCTGTTTT GATGATCTTA ATCGCTTCTT TTCTTCTTCT TGTCCTTCAA AACGTCGAAA TTGTTAACGC CGTCGGATGT ACCGGAAGCT TCTTCAACGT TAACAGCAGC TACGCTCAGA ATCGCCGTGA ACTCTTCTCT ACTCTTGCTG ATAAAGTCGT CACCAACGGT GGCTTCTACA ATGCTTCACT CGGCAAAAGT CCCAACAGAG TTCACGCTGT TGCCCTCTGC GGAAGAGGAT ACGAGCAACA AGCTTGTATC AGTTGTGTCG AAAGTGCGAT TCGGGGTATA CTAACGACAA CAAGTTGTCT AAACCGCGTG GATTCATTCA CGTGGGACAA AGACGAGGAA GACAACGTTT CTTGTCTTGT AAGTACCTCA AACCACTCTA CTTTTGGGAA CCTCGAGCTT AGACCTTCTG TTAGATACCA AAGTCCAAAT AGTATCGAGC CATCGAAAAA CATGACCCTT TTTGAACAAG AATGGAATGC AATGGCTAAT CGGACCCTCA AGGCTGCAAA AGAAGCTGAA ACTTCCTCGG TACTTAAGTA CTATAGTGCC GAAAAAGCCG AGTTCACAGA GTTTCCAAAT GTTTACATGC TGATGCAATG CACACCAGAC ATAACTTCCC AAGATTGCAA GACATGTCTT GGAGAATGTG TGACGCTTTT TAAAGAACAG GTTTGGGGAA AACAAGGAGG CGAGGTTTAT CGTCCGAGCT GTTTTTTCAG GTGGGATCTA TATGCTTTCC ATGGTGCTTT TGATAATGTA ACAAGAGTTT CTGCGCCTCC TCGACCTCAA GCTCAGGGAA AAGAGAGCTC TATAACAGAA AAGAAAGGAA GAAGCATTGG ATATCGTGGA ATTATCGCGA TAATTGTGGT TCTTACTTTC ATTAATCTTT TGGTGTTTAT TGGCTATATC AAAGTCTATG GACGGAGGAA AGAATCATAC AACAAAATCA ATGTTGGGAG TGCAGAGTAC TCTGATTCTG ATGGTCAATT TATGTTAAGG TTTGATATTG GTATGATCTT AATGGCAACT AATGACTTCT CGTCTGAAAA CACGCTTGGC CAAGGTGGAT TTGGTACGGT CTATAAGGGG AAATTACTAA ACGGGCAAGA GATAGCGGTG AAGAGACTAA CAAAAGGTTC AGGACAAGGA GATATAGAGT TCAAGAATGA GGTTTCACTA TTGACAAGAC TCCAACATAG GAATCTAGTT AAGCTTCTTG GGTTCTGTAA TGACGGAGAT GAACAGATTC TTGTCTACGA GTTTGTCCCC AACTCAAGTC TTGATCACTT TATCTTCGAT GAAGAGAAGC GTTCACTTCT TACATGGGAG ATGAGATGCA GAATTATAGA AGGCATTGCT CGAGGTCTTC TTTATCTTCA TGAAGATTCT CAGCTAAAGA TTATTCACCG AGACTTGAAG GCAAGTAACA TCCTTTTAGA TGCAGAGATG AATCCTAAAG TTTCAGATTT TGGGACAGCG AGGTTGTTCG ACTCCGATGA GACCCGAGCT GAAACAAAAA GAATAGCTGG AACCCGTGGA TATATGGCTC CCGAGTACTT GAATCATGGG CAAATCTCAG CTAAATCTGA CGTTTATAGC TTCGGTGTTA TGCTTCTAGA GATGATAAAT GGTGAAAGAA ACAATAGCTT CGAAGGAGAA GGACTTGCAG CATTTGCATG GAAAAGATGG GTTGAAGGAA AGCCTGAGAT TGTAATTGAT CCTTTCTTGA TAGAGAATCC AAGAAACGAG ATCATAAAGC TGATTCATAT TGGCTTGTTG TGTGTTCAAG AGAATCCAAC AAAGAGACCA ACCATGAGCT CTGTAATAAT TTGGCTTGGC AGTGAGACTA TCATCATTCC TTTACCTAAA GCTCCTGCTT TCACTGGAAG TCAATCCCAA TCTGAAAATG GTATAATGTC AATGAGCGAC GATGTCTTCA CAGAGTTGAG TTGTCGTTGA 
Length1980
Protein Sequence
Protein Residue
Map Locationscaffold_6: 21089234.. 21091763
Download Sequence
A.thaliana
AGI-codeAT4G04540.1
Descriptioncysteine-rich RLK (RECEPTOR-like protein kinase) 39
TAIR curator summaryEncodes a cysteine-rich receptor-like protein kinase.
Alias[CRK39][cysteine-rich RLK (RECEPTOR-like protein kinase) 39]
Gene coexpression
MR
MR Locus Description
13.4164 Ahg950909 Major facilitator superfamily protein
19.8242 Ahg470722 exocyst subunit exo70 family protein B2
20.8567 Ahg321719 Protein kinase family protein
23.2379 Ahg480406 fucosyltransferase 4
26.4386 Ahg887642 Disease resistance protein (TIR-NBS-LRR class)
29.6648 Ahg336505 leucine-rich repeat transmembrane protein kinase family protein
30.133 Ahg933572 NAD(P)-binding Rossmann-fold superfamily protein
30.4631 Ahg473694 Protein kinase family protein with leucine-rich repeat domain
30.8221 Ahg908904 Toll-Interleukin-Resistance (TIR) domain-containing protein
31.5278 Ahg474812 Disease resistance protein (TIR-NBS-LRR class) family
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression