Detail



ID : Ahg896655

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|896655|Al_scaffold_0005_621
Sequence
ATGGAGCAAT TATCTAATGG CGTTAGAGAT CACTGTTTGA TCAGTGACTA TATTTCTCCT TCAGCTCCTG CTCCTCTTAA ACAGCCTTTC GTGATCGGTG TTGCCGGAGG AACCGCCTCC GGGAAGACGA CGGTTTGCAA TATGATCATG TCTCAGTTAC ACGATCAACG TGTTGTCCTT GTGAACCAAG ATTCGTTTTA TCATTCGCTT AGTGAGGAGA AACTGAAGAA GGTTCATGAA TATAATTTCG ATCATCCTGA CGCATTCAAC ACCGAGGTGT TGCTTTCGTG TATGGAGAAA CTACGATCTG GACAACCAGT GAACATTCCG AGTTATGATT TCAAAATCCA CCAGAGCATT GAATCATCAA GTCCGGTTAA TCCTGGTGAT GTAATCATCT TAGAGGGAAT CCTAGTTCTT CATGATCCTC GAGTTCGTGA TCTCATGAAC ATGAAGATCT TTGTTGATAC AGATGCTGAT GTACGGCTTT CGAGAAGAAT ACAACGTGAT ACCGTCGAGA GAGGAAGAAA CATCCAAAAT GTGCTTGAAC AGTATACAAA GTTTGTGAAG CCTAGTTTTG ATGAATTCAT CCAGCCATCG ATGAAGTACG CTGACATAAT CATTCCTCGA GGAGGAGACA ATGATGTTGC AATTGACCTT ATTGTTCAAC ATATCCGTAC AAAGCTGTGC CAACACAATC TCTGTAAGAT ATACTCAAAC ATCTTCATCA TATCTTCAAC ATTCCAGATC AAAGGAATGC ATACTCTTAT CCGCGACATC AACACAACAA AGCATGATTT CGTCTTTTAC GCTGACCGAT TGATTCGACT GGTCGTGGAA CATGGACTTG GTCATCTTCC TTTCACAGAG AAACAGATCA CCACTCCAAC AGGGTCAGTG TACACTGGAG TCGACTTCTG CAAGAGATTG TGTGGCGTCT CAGTGATCAG AAGTGGAGAA AGCATGGAGA ATGCACTAAG AGCTTGCTGC AATGGAATTA AGATTGGTAA AATTCTCATT CACAGAGAAA ATAACGATGG TCGTCAGTTA ATATATGAGA AGTTGCCGAA AGATATCTCA AGCAGACATG TCTTCCTCCT TGACCCTGTT CTAGCTTCAG GATACTCGGC AGTGAAAGCT ATAACTTTGC TTCTGAGCAA GGGTGTTCCA GAATCACATA TCATCTTTCT CAATCTTATA GCAGCACCTC AAGGTATCCA TGCACTCTGC AAGAAATTCC CAATGCTAAA GATTGTGACT TCGGAAATCG ATGCATCCCT CAATGAGGAC TCACGTGTGA TTCCAGGCAT GGGAGAATTT GCAGACCGTT ACTTTGGTAC AAACAACATT AATTCAAAAG TATCAAGCTT GTCTGCAAAT CTCAAGTTAA GCTAA 
Length1395
Protein Sequence
Protein Residue
Map Locationscaffold_5: 3564126.. 3566513
Download Sequence
A.thaliana
AGI-codeAT3G27440.1
Descriptionuridine kinase-like 5
TAIR curator summaryOne of the homologous genes predicted to encode proteins with UPRT domains (Uracil phosphoribosyltransferase). Five of these genes (At5g40870, At3g27190, At1g55810, At4g26510 and At3g27440) show a high level of identity, and are annotated as also containing a N-terminal uracil kinase (UK) domain. These genes are referred to as UKL1 (UK-like 1), UKL2, UKL3, UKL4 and UKL5, respectively.
Alias[UKL5][uridine kinase-like 5]
Gene coexpression
MR
MR Locus Description
5.83095 Ahg951007
10.8167 Ahg916422 low-molecular-weight cysteine-rich 12
15.3623 Ahg943348 Cystatin/monellin superfamily protein
22.9783 Virus2934
25.0799 Ahg471519 phytosulfokine 1 precursor
37 Ahg344273 Arp2/3 complex, 34 kD subunit p34-Arc
39.1152 Ahg497231 Protein of unknown function (DUF295)
39.1152 Ahg496144 Protein of unknown function (DUF295)
41.6893 Ahg891106
42.7083 Ahg477084 SAUR-like auxin-responsive protein family
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression