Detail



ID : Ahg896835

Blast(Query) A.halleri   /   A.thaliana (NOT RECIPROCAL)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|896835|Al_scaffold_0005_801
Sequence
ATGGCTCACT CGTCTTCTTC TTGCACTTGG GTTTATGATG TCTTCCCGAG CTTCAGTGGG GAAGACGTCC GCGTAACTTT CCTTAGCCAC TTTCTCAAAG AGCTTGATCG GAAATTAATC ATTGCTTTCA AAGACAACGA GATTAAGAAG AGCGAATCGC TCGACCCCGT TCTTAAACAA GCGATTAAGG ATTCGAGGAT TGCGGTGGTC GTGTTCTCCA TAAATTATGC CTCTTCAACA TGGTGTCTTA ACGAATTGGT GGAGATAGTG AAATGCAAGG AAGAGTTTAG TCAAATGGTG ATACCGGTTT TCTACCGTTT GGATCCTTCA CATGTGAGGA AGCAGACCGG TGACTTTGGG AAGATCTTTG AAAAAACATG TCACAACAAA ACAGAGGAGG TGAAAATTCA ATGGAAGGAA GCCTTGACCA GTGTAGCTAA TATTCTTGGA TATCATTCTA CGACTTGGTT TAATGAAGCA AAAATGATTG AAGAAATCGC CAATGATGTT TTAGATAAGC TGCTTTTAAC TACATCGAGG GATTTTGAGG ACTTTGTTGG CATTGAAGAT CATATTTCTG AAATGAGTAT ATTGTTGCAA TTGGCATCTA AAGAAGTGAG AATGGTTGGT ATATGGGGTT CCTCAGGGAT TGGTAAGACT ATCATTGCAA GAGCTCTATT TAACCGACTT TCTCGACACT TCCATGGTAG TATTTTCATC GATAGAGCTT TCATATCTAA GAGCATGAAT ATTTATTCTC AAGCCAATTC TGATGACTAC AACTTGAAGT TACATATGCA AGGAAAATTC CTGTCTCAAA TTTTAGACAA AAAGGACATA AAAGTATATC ATTTAGGTGC AATGAGAGAG AGGCTAAAGA ACCGGAAAGT TCTAATCTGT ATTGATGATT TGGATGATCA ACTGGTGTTA GATGCCTTGG TGGGTCAAAC TCATTGGTTT GGATGTGGGA GCAGAATCAT TGTCATTACA AAAGATAAGC ACTTTTTAAG AGCGCATAAA ATTGATCATA TTTACGAGGT CCGTCTCCCA TCTGAAGAGG CTGCTCTTGA AATGTTATGT CGATCTACTT TCAAGCAAAA GTATCCGCCT GATGGGTTTT TGGAACTTGC TTCTGAAGTT GCATTGCGTG CCGGTAATCT TCCTTTGGGT CTTAACATAT TGAGTTCCTA TTTGCGAGGT AGGGATAAAA AGGAGTGGAT GGATATGCTG CCAAGGCTTC GAAATGATTT GGATGGAAAA ATTGAGAAAA CACTAAGAGT CAGCTACGAT GGATTAAATA ACAAAAAGGA TGAAGCGATA TTTCGTCACA TTGCATGTCT TTTTAATCGT GAGAAAATCA ATGACATCAA GCTGTTATTG GCAAATAGTG ACTTGGATGT TACTATCGGG CTCAAAAACC TCGTTGATAA ATCTCTTATC CATGAAAGTT ACGATATAGT GGAGATGCAC TCTTTGCTAC AAGAAATGGG AAAAGAGATT GTTCGTATGC AATCCAATGA GCCCGGAGAA CATGAGTTTC TTGTGGATTG GAAAGATATT TGCGATGTAC TTGAAGATAA CAAAGGTACT AAAAATGTTT TAGGTATATC ATTGGATATA GATGAAATTG ATGAAGTACA TATACATGAG AATGCTTTCA AAGGGATGCG TAATCTCTTT TTTCTAAAGT TTTTCACAAA GCGGCAGAAG AAAGAAATAA GATGGCACTT ATCAAAAGGT TTTGATCATT TCCCTCCTAA GCTAAGATTA CTGAGCTGGG AAAAATACCC GTTGAGATGT ATGCCTTCTA ACTTTCGTCC TGAAAACCTC GTTAAACTCG TAATGCGGTG GAGCAAACTC GAAAAGTTGT GGGATGGAGT TCATTCACTT ACAGGGCTCA AGGAAATAAA TTTGTGGGGA TCCAAAAACC TGATAGAAAT CCCAGATCTT TCTATGGCCA CTAATCTCAA GAAACTTGTT CTCAACGATT GCTCGAGTTT GATGGAGATT CCTTCCTCAA TTCAGTATCT CAATGAATTA TACGATTTTC ATATGGAACG TTGCGAAAAT CTTGAGATTC TTCCTACTGG AATTAATCTC CAATCTCTCT ACGACCTCAA TCTCATGGGA TGTTCACGGT TAAAGAGTTT TCCTGATATC TCAAGCAACA TCTCAACGCT CGATCTATAT GGAACAACCA TAGAAGAATT CCCTTCTAAC TTGCATTTGG AGAATCTCGT GAATCTTAGG ATGTGTGAAA TGAGGAGTGA GAAATTGTGG GAAAGAGAAC AGCCGCTTAC ACCCCTCCTG AAGATGGTGT CTCCTTCTTT GACAAGAATT TATCTCTCGA ATATCCCTAC TTTGGTGGAG CTTCCTTCTT CAATTCATAA TCTCCATAAA CTAGAGGAAT TGAGTATTTG GAACTGCAAA AATCTTGAGA CTCTTCCAAC TGGAATCAAC CTCAAATCTC TGTATAGCCT TGATCTTAGT GGATGCTCAC AGCTGAGGTG TTTTCCTGAT ATTTCAACCA ATATCTCTGA GCTCTTTCTC AACGAAACAG CGATTGAAGA GGTTCCTTGG TGGATAGAGA ACTTCATAAA TCTAAGCTTC ATAAACTGTG GGGAGTTGAG TGAAGTCATC TTGAATAATA GTCCAACTTC AGTGACCAAC AATACTCACT TACCAGTCTG TATCAAATTC ATCAACTGCT TCAAAGTGGA TCAAGAAGCT CTCCTTATGG AACAATCGGG TTTCTTCGAG TTTTCGTGTG ATGAAGTGCC TTCATATTTC ACTCACCAAA CTATTGGAGC CTCTCTGATC AATGTACCTC TTCTTCACAT CTCTCCTTGT CAACCATTCT TCATATTTAG GGCTTGCGCC TTGGTTGATT CCGAATCTAT TTTCATAGAT AGTCCATCCA AATTCCAGGT ATGTTGTCGG TTCATAGACA GCCTCGGAAA CCACTTTGAT CCCCCTAATC AACACCATGT CTTCTCAGCA TATAAGAAAG CTAGTCATAT GGTTATATTT GAGTGTTGTT TCCCTCTAAA CGATGACAAT GCTCCTCTAG CTGAACTTAA CTATGATCAC GTGGATATAC AATTCCATCT TACTCATAAA AACTGTCAGC TCAAACTAAA AGGATGTGGT ATACGATTCT TTGAGGACGA TGAAAGCAGT GACGGTAATG AGACTGAATA CAATGAAGAG TGTCCATATA GCGATGATAA GTATTTTGGC AGTGAAAAGT GGGAAGACTG CGATGATAGT GATCTTAGCA GTGAAATTGA ACAGTGGAAA GACTGCGAGG TTAGTGATCT TGGCTATGAG ACTGATCACA GTTCGTAG 
Length3348
Protein Sequence
Protein Residue
Map Locationscaffold_5: 4844004.. 4848488
Download Sequence
A.thaliana
AGI-codeAT5G46450.1
DescriptionDisease resistance protein (TIR-NBS-LRR class) family
TAIR curator summary
Alias
Gene coexpression
MR
MR Locus Description
42.5441 Ahg949481 Predicted AT-hook DNA-binding family protein
62.8888 Ahg930560 Pentatricopeptide repeat (PPR) superfamily protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression