| Annotation |
|---|
| Description | jgi|Araly1|897208|Al_scaffold_0005_1174 |
| Sequence |
ATGATTGCGG AGAAACCCTC TTGGGTTAAA CATGAAGGGG TACAGATATT CTCCATTGAT GTTCAGCCTA ATGGAGAAAG GTTTGCTACA GGCGGTGGTG ACCACAAGTC TGTTGACAAG GATTTGCAAA ACTTAGATAC AAAAGAGAGG CTTCTCGCAA CTCTTCGTGA CCACTTTGGG TCAGTCAACT GTGTTAGGTG GGCCAAGCAC AGTAGGTATG TAGCATCTGG TTCTGATGAT CAAGTGATAC AAATTCATGA GAGGAAGCCT GGTTCAGGCA CCACTGAGTT TGGTAGTGGA GAAGCCCCCG ATGTTGAGAA CTGGAAAGCT GTAATGACTT TAAGGGGACA CACTGCCGAT GTGGTGGATC TTAATTGGTC TCCAGATGAT TCGATGCTGG CTAGTGGGAG TTTGGACAAC ACAGTCCATA TCTGGAATAT GCGCACTGGT ATGTGCACTA CTGTTCTCAG GGGTCACTTG AGCTTGGTTA AAGGTGTAAC TTGGGATCCA ATCGGGTCAT TTATTGCTAG CCAATCTGAT GACAAAACTG TGATAATATG GCGAACAAGC GATTGGGGCA TGGCTCACAG AACAGATGGT CACTGGGCAA AATCGCTTGG ATCCACATTT TTCAGGCGAC TTGGGTGGTC CCCTTGTGGC CACTTCCTTA CTACTACTCA TGGATTTCAG AAGCCGAAGC ATTCTGCTCC AGTTTTAGAA AGAGGGGAAT GGTCTGTAGC ATATGACTTC TTAGGACATA GTGCTCCAAT CATTGTTGTT AGGTTCAATC ATTCAATGTT CAAAAGAATA TCCTCTAGTA CCCAGGAAAC TAAACAAGTT GGGTGGAGCA ATGGAACATC AAAGACAGGG GGGAAAGATT TGCAGTCATA CAATGTTATT GCAATGGGGA GTCAAGACCG TACTATAACC GTATGGACAA CTGGAAGTGC GCGTCCTCTT TTTGTCGCGA AGCATTTCTT TGGCCAAAGT GTTGTGGATC TATCATGGAG TCCAGACGGA TATTCACTTT TCGCATGTTC CTTGGACGGA ACAGTGGCGA TGATTCACTT TGACCCAAAA GAACTAGGCG TCAGGCTAAC CAATACTGAA CTTGACGAAT TGAAGAAAAG TCGATATGGA GATGTCAGAG GCCGGCAAGC AAACTTAGTT GAGAGCCCTG CCCAGTTATT ACTTGAAACA GCCTCGACAA AGCAAACCGG TAGTAAGAGG GCGGCATCGG ATGTTCAACA AAATCAGGTG ACAACAAAAC CATCTGCTAG TGTGGAGAGT ACTGCAAAAA GGCGTAAATC GCAAGTCGAT GATCCGAATA AGGCAGCAGA GGCTACTGGT CACACATTAA ATAAAGCATC AACCTTAAAT CGTGTATCTA GTCCTGTGAA TCAAAAAGTG TATAGAAGGC CTGACGGAAG AAAGAGGATC ATTCCTGAAG CTGTTGGAGT TCCCCAACAG GAGAATAATG TCATGATTAA TGGGCAATCA CATAATTTTC TGCCTGCTTC CGCTGCTGCT CCTAGTAAGG GAGATAGTGG AGATTTTCCT GTGGAGATTA GCAATATAGA TTTGTCCGGG AAAGAAATAG TGTGCAGGAA CCCTGATCTG AAAGAGCGTT CAAGGATTAC AGCTCGTGCT ACCATTACTG AGAGCCTTAT TATTGAGAAG GTTCCTGGAA CCTCTGGTAG AGATGGAGTT TTAAATGTTG AGCAATCTGT AGGTATAAAA GAATCTTCTA GCACAGATCT GTTGATAAGG GTATTCGATT GGAAAGATGG GGAAGCCGCA CCACCTGTTT GCTTAGAAGC TTGTCCACGG GAGCATGCTC TGGACACTGT TGGTGCAATA AGTACATCTA TGGTCAAGGA AACTGAGATT TCTTGCAAAA AATCAGGCGA AACTCTTTGG TCTGATCGGA TTATGGGGAG AGTCACTGTT TTGGCTGGAA ATCCAAATTT TTGGGCTGTT GGATGCGAAG ACGGAAGCCT CCAGGTGTAC ACTAAGTGTG GAAGGCGTGC TATGCCTACA ATGATGATGG GGTCTGCTGC AACATTTATT GATTGCGACG ATAGCTGGAA ATTGTTGCTT GTAACAAGAA AAGGATCTCT ATATGTATGG GATCTATTCA ATAGGAAATG CGTTCTCCAT GACTCTCTAT CTTCTTTGGT CTCTTCCAAT GTCAATTTAT CTTCCACAGT AGAAGGTACG ATAAAAGTGA TATCTGTGAA ATTATCCAAA TCTGGTTCAC CACTTGTTGT TCTAGCCACA CGTCATGCAT TCCTCTTCGA CACGAGTCTA ATGTGTTGGC TGAGAGTGGC TGATGACTGC TTTCCGGCCT CAAATTTCAG TAGCTCCTGG AATTTGGGCT CAGCCCCATG CGGCGAGCTT GCTGGTTTGC AGGTTGATGT CAGAAAGTAC ATGGCTAGAA AGCCAGGGTG GAACAGGATA ACTGATGATG GAATGCAAAC ACGTGCACAT TTGGAATCTC AACTTGCATC TTCTCTTGCA CTTGAGTCTC CTTTTGAATA CCGCCAGTGC CTCCTTGCCT ATGTGAGGTT TCTAGCAAGA GAGGCAGACG AGTCCAGATT AAGAGAAGTC TGCGAGAGCT TTCTTGGACC TCCAACTGGT ATGGCTGAAG CAGCATCTTC AGACACAAAC TTGTCTTGGG ATCCTAATGT TCTGGGGGTG AAGAAGCATA AACTTTTGAG AAACGATATT CTCCCTGCAA TGGCGTCAAA CAGAAAAGTG CAGCGTCTAC TCAATGAGTT TATAGATCTC TTATCTGAAT ATGAAGACGC AGAAACAGCA GATCCTGCCC CCAAGGGCTC GACACCTACC ATGAACTGTG GTGGAGCCCC ATCTTCACTT GATCAAATGG GCTCTGATCC ACCAGCCATG ACAGCTACTA CCCCTATGAC AGTAGACAAT GACAAACCAG TTTCTGTGGC GAATTCAGTG GCTTTGGAGA TAGGCGTGTG TGAGAAACCG GGTTCTGAAG ACCGGGATAG ACAAGACCAG AACTCAAGAG ACCCAGGCTC TTGA |
| Length | 3054 |
| Protein Sequence | |
| Protein Residue | |
| Map Location | scaffold_5: 10466790.. 10472210 |
| Download Sequence |
|
| A.thaliana |
|---|
| AGI-code | AT3G44530.1 |
| Description | homolog of histone chaperone HIRA |
| TAIR curator summary | Encodes a nuclear localized WD-repeat containing protein involved in negative regulation of knox gene expression via epigenetic mechanism of chromatin re-organization. Interacts physically and genetically with AS1. Expressed in meristem and leaf primordia. Homozygous mutants are embryo lethal. Phenotype of cosuppressed lines is variable but show effects on leaf development similar to as1/as2. |
| Alias | [HIRA][homolog of histone chaperone HIRA] |
| Gene coexpression |
|---|
| MR |
| MR | Locus | Description |
| 4.24264 |
Ahg490610 | Protein of unknown function (DUF616) |
| 7.87401 |
Ahg495654 | RNA-binding (RRM/RBD/RNP motifs) family protein |
| 8.3666 |
Ahg490295 | bZIP transcription factor family protein |
| 8.94427 |
Ahg920352 | Mitochondrial substrate carrier family protein |
| 10.9545 |
Ahg476949 | Translation initiation factor IF2/IF5 |
| 16.2481 |
Ahg488289 | beta-1,4-N-acetylglucosaminyltransferase family protein |
| 17.4642 |
Ahg481550 | ARM repeat superfamily protein |
| 18.2209 |
Ahg951540 | Disease resistance protein (CC-NBS-LRR class) family |
| 18.8149 |
Ahg927711 | N2,N2-dimethylguanosine tRNA methyltransferase |
| 21.8174 |
Ahg481705 | 5'-AMP-activated protein kinase beta-2 subunit protein |
|
| RNA-seq |
|---|
Seasonal expression (July 2011 to June 2013) |
|
|
| The four seasons |
|
|
| Growth Chamber expression |
|
|