Detail



ID : Ahg898830

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|898830|Al_scaffold_0005_2796
Sequence
ATGGAGATTC CGGAGAGAGC TAGCGCTCGA TTAGCCGTTC TCACTGCGCA CTTGGCGGCA TCTGAGCCGA CTCAGGTGTT GCCGACGATC GAGCCGTGGT GCACATCATC TCACATTAGT GCTACACCGC ATGGATCCCT TGAAGGAAAC TTGACGATCG TCGACGAACG TACGGGTAAA AAATATCAGG TCCCTGTCTC AGAGCATGGT ACCGTTAAAG CCGTTGATCT CAAGAAGATA ACGACAGGGG AGGATGACAA GGGGCTTAAG TTATACGATC CTGGTTACTT AAACACGGCT CCTGTTCGAT CTTCGATTTC TTACATCGAT GGAGATGAAG GGATCCTCCG TTACCGGGGA TACTCAGTCG AGGAGTTGGC TGAGAAAAGT ACTTATACAG AGGTTACTTA TCTCCTAATT TATGGGAATC TGCCTTCTCA ACGACAGCTA GCTGATTGGG AGTTTGCGAT TTCTCAGAAT TCAGCTGTGC CACAAGGAGT ATTGGATCTC ATACAGTCCA TGCCTCATGA TGTACATCCA ATAGGAGCTC TTGTCACTGC AATGAGTGCA CTTTCCATCT TTTATCCTGA TGCAAATCCT TCTCTTATGG GCCTAGGTGT TTACCAGTCA AAACAAGTTC GTGATAAACA GATTTTTCGT ATTCTTGGAC AGGCACCAAC AATTGCAGCA GCTGCTTATT TGAGGAAGGC AGGCAAGCCT CCTGTTCAAC CTTTGAGCAA CCTTTCTTAT TCAGAGAATT TCCTCTATAT GGTGGAATCA ATGGGAAATA AGTCTTACAA GCCTAATCCT CGGCTAGCTC GAGTGTTGGA CATTATCTTC ATTCTGCATG TTGAACATGA GATGAACTGC TCTACTGCTG CTGCTCGGCA TCTTTCCTCT AGTGGTGTTG ATGTGTATAC TGCTGTTGCG GGAGGTGTTG GAGCCATTTA TGGTCCACTT CATGGTGGTG CAATTGAGGC TACGGTTAAC ATGTTATCAG AGATTGGCAC TGTTGAAAAT ATTCCAGAGT TCATTGAAAG CGTGAAGAAT AAGAAGAGGA AGTTGTCGGG TTTTGGTCAC CGTGTTTACA AAAAATACGA TCCTCGAGGA AAAGTCGTTA AAAAACTGGC GGATCAAGTG TTCTCCATTC TTGGAAAGGA TCCTCTGTTT GAGGTAGGAG ATGCTCTAGA GAAGGCGGCA CTCTCGGATG AATATTTCAT TAAAAGAAAG CTTTACCCAA ATGCTGATTT CTACTCTGGA TTAATCTATA GGGCAATGGG AATCCCATCA TCATTCATGG CAGTCGCACG TATTGCTGGA TACTTGTCAC ACTGGCGTGA GTCGTTAGAT GATCCTGACA CAAAGATCAT GAGACCCCAG CAGGTCTATA CTGGAATGGG GCTAAGGCGT TACGAGCTAG TGAGAGAAAG AACCAAGCTG TGA 
Length1443
Protein Sequence
Protein Residue
Map Locationscaffold_5: 17963904.. 17966633
Download Sequence
A.thaliana
AGI-codeAT3G58740.1
Descriptioncitrate synthase 1
TAIR curator summaryEncodes a peroxisomal citrate synthase that is expressed in siliques and developing seeds.
Alias[CSY1][citrate synthase 1]
Gene coexpression
MR
MR Locus Description
15 Ahg492605 Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein
21.2603 Ahg928698
26.2107 Ahg492961 AtS40-3
39.6863 Ahg495086 Cysteine proteinases superfamily protein
40.7431 Ahg931494
49.7192 Ahg479186 Plant invertase/pectin methylesterase inhibitor superfamily protein
53.9907 Ahg920443
55.1362 Ahg930506
62.498 Ahg922695
62.6418 Ahg931085
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression