Detail



ID : Ahg899207

Blast(Query) A.halleri   /   A.thaliana (NOT RECIPROCAL)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|899207|Al_scaffold_0005_3173
Sequence
ATGGATTCGG AAGCTGTGAA GGAGTTTATA CGAAGGGAAG TTTCAGATTG GGACGATGAG GTGGTGGCGA CGGCTAGATT CAAGGCGTTT AGTGGGCAGA GATCCAATTG GGAACTTAAA TTTCAGTTTT GGCGTGATTT GATCCTCAAG GTTTTGCGTC AGTTTGGGTT GTTCATCATT GATCCTGTTC AGGTGAAGAA GGCGTGGTTT AATCGAGGAG GAATAACGCC TTTATGCATT GATCATGTTC TGTTATTGAT GCATAGTGAA GGTGATGTTG TGCGGATTAG CGATATTGAT GATCCGGGTA GTGGTCGTAT TTCTCGTTTA TTGAGGACAG TGAGGAACTT GATGGTTCAA CAGTCAGTGA AGCCGGAAGA GATTCTGGAA AATAAACTTG TTATTGTACC ACTCTTGAAG GAGAAGGCTG CTGACGTGGT TAATATATTA TCTGAGGGAC ACTGGACTTC TACTTGTGTT GTCACGCTCA AGAAGTTTCG GAATTTGTGC AACGGCTCGA ATGAGGCATC TGCTGTTTTG AGTCACTTGT CAGGGTGTGG AAAAGCGCAT AAAATCTCTA TCAATCGGGG AGAACTGATC GAGGGCATTA AAGTGTCCTT TTCACAAGCA GCACTTCCCA GTATCTCAAC TTTAGACTGT GATATTCTGC ACTTGCTAAG GACTACAGAA AAGCTCCAAG ATCAACTTGA AGTGATGGAC CAACGTTGTG AAAAGTCAAA GAAATCAGCG CTGGCATCTC TAAAGTCTGG ACACAGGAAA GTTGCTCTAC GGCATGCAAG GGAATTGAAG TTGGCGACTG AGAGCAGAGA AAAATGCACG TCACTTCTGA ACAGAGTAGA AGAAGTGTTG AACACTATAG CGGATTCTGA ATCTACGAAA ATGGTCTCAG AAGCAATCAA AACTGGAGCT AGGGTTATGA AGGACATCAA GATCAGTGCA GATGATGTTC ATGACTATTT AGAAGAACTT GAGGAAACTA TTGAATCACA GAAGCAAGTC GAAAAAGCTC TCGAATCAGC TCCATATCCA GATACTGATG ATGAAAATAT CGAAGACGAA TTACTGGAAT TAGAGATGGA CCTTGAAAGT GAAAGTTCTC AGGTCCTACC AGCGAATTTA GATACTGCAG ATTCACTGAC TGAGATGTTC TCAGAGCTTA AACTTGGCAA GACGAAACAA ACATTGGAGC CAGCTCGGAT GAAAGATAGC GGAAAAAAGA TTCTTGAAGC AGCATAG 
Length1257
Protein Sequence
Protein Residue
Map Locationscaffold_5: 19519782.. 19521877
Download Sequence
A.thaliana
AGI-codeAT3G62080.2
DescriptionSNF7 family protein
TAIR curator summary
Alias
Gene coexpression
MR
MR Locus Description
8.60233 Ahg930301
19.3907 Ahg949208
19.3907 Ahg952467
25.3772 Ahg905723 Tetratricopeptide repeat (TPR)-like superfamily protein
30.6268 Ahg948922 Protein of unknown function (DUF784)
39.7618 Ahg485843 SHI-related sequence 6
80.8146 Ahg494746
81.9268 Ahg357047
82.7043 Ahg923168 RNI-like superfamily protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression