| Annotation |
|---|
| Description | jgi|Araly1|899620|Al_scaffold_0004_270 |
| Sequence |
ATGACTCGCA AAATTCTCTT AACAGTTACA TTGATCTGCA TTGTATCTCT CGGTGTCGGT GGCCAATCTC CGGCCACCGC ACCGAGCCAT TCTCCTTCTA TATCTCCTCA AAAGCCTAAA GCCACATCTC CCGCCATTTC TCCATCTCCG GAATTAACTC CCACGACGGA GGCTCCGACG CAGACTCCAG TAGAACCACC CGTCGAGGCT CCTCCTTCTC CTACACCTGA GGCTTCTTCT CCGCCTGGTC CTTCACCGGA GGCTGATACA CCTTCTGCTC CGGTGGATGC GCCAACAGCT GACGTCCCGG CTCCAGCTCC GAGCAAACAT AAGAAGAAGC GTAAGACCGC CCCGGCTCCC GGACCAGCTT CGGAGATTTT AAGCCCGCCT GCTCCGCCCG GGGAAGCTCC TGGTCCTGGA CCAAGTGATG CTTTCTCCCC CACCGCCGAC GATCAGAGCG GAGCAGAAAA AAGAAGTGTG ATACAAAATG TGATGGTGGG AGCTGTGGCA ATCGCATGGC CTCTACTTGC TCTAGCCTTC TAA |
| Length | 543 |
| Protein Sequence | |
| Protein Residue | |
| Map Location | scaffold_4: 1490824.. 1491605 |
| Download Sequence |
|
| A.thaliana |
|---|
| AGI-code | AT2G23130.1 |
| Description | arabinogalactan protein 17 |
| TAIR curator summary | AGP17 is a lysine-rich arabinogalactan-protein (AGP) and part of a multi-gene family of glycoproteins with approx. 50 members. It falls into one subclass with AGP18 and AGP19, other lysine-rich AGPs. 84% of its proline residues are hydroxylated to hydroproline and its heavy glycosylation accounts for appr. 69% of the molecular weight. The main glycosyl residues are arabinose (30.1%) and galactose (55.1%). Glycosyl linkages are consistent with type II arabinogalactans. AGP17 is predicted to have a glycosylphosphatidylinositol (GPI)anchor and is localized to the plasma membrane and Hechtian strands. It is expressed in young/old leaves, shoots, suspension cultures and flowers. |
| Alias | [AGP17][ATAGP17][arabinogalactan protein 17] |
| Gene coexpression |
|---|
| MR |
| MR | Locus | Description |
| 4.58258 |
Ahg890648 | proline-rich family protein |
| 5.74456 |
Ahg493180 | arabinogalactan-protein family |
| 7.07107 |
Ahg940775 | |
| 7.74597 |
Ahg924996 | Pectin lyase-like superfamily protein |
| 8.83176 |
Ahg483921 | Tetratricopeptide repeat (TPR)-like superfamily protein |
| 13.1149 |
Ahg480276 | Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein |
| 15.3297 |
Ahg486407 | enzyme binding;tetrapyrrole binding |
| 17.4929 |
Ahg947488 | beta-1,3-glucanase_putative |
| 18.0831 |
Ahg931800 | 3-ketoacyl-CoA synthase 9 |
| 18.3303 |
Ahg476393 | germin-like protein 1 |
|
| RNA-seq |
|---|
Seasonal expression (July 2011 to June 2013) |
|
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| The four seasons |
|
|
| Growth Chamber expression |
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