Detail



ID : Ahg902003

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|902003|Al_scaffold_0004_2653
Sequence
ATGGAGGCTG CAAAAGTTTA CACACAAGAT GGCACCGTCG ACCTCCAAGG CCGTCCCGTC CTCGCCTCCA AGACAGGTCG TTGGAGAGCT TGCTCTTTCC TCCTCGGGTA TGAAGCGTTT GAGAGGATGG CGTTTTATGG AATAGCGTCG AACTTAGTGA ATTATTTGAC CACAAGACTT CACGAAGACA CTATCTCTTC GGTTAGAAAT GTGAATAATT GGTCCGGTGC GGTTTGGATC ACTCCCATCG CCGGAGCTTA CATCGCCGAC TCATACATCG GCCGCTTCTG GACATTTACT GCCTCCTCTC TCATCTACGT CCTGGGGATG ATTCTCTTAA CAATGGCGGT AACAGTAAAA TCCCTAAGAC CGACATGCGA AAACGGGGTA TGCAACAAAG CCTCCTCCTT ACAAATAACA TTTTTCTACA TATCCCTCTA TACAATAGCT ATTGGAGCCG GTGGAACAAA ACCTAACATT TCCACATTTG GAGCGGACCA ATTCGACAGC TATAGCATTG AAGAAAAGAA ACAAAAGGTT TCATTCTTCA ATTGGTGGAT GTTTAGCTCT TTTTTGGGCG CTTTATTTGC AACATTAGGG CTCGTCTACA TCCAAGAGAA TCTCGGATGG GGTTTAGGTT ATGGCATTCC TACCGTAGGA CTATTGGTTT CTCTCATTGT GTTCTATATC GGAACACCAT TTTACAGGCA TAAGGTTATC AAATCAGATA ATTTGGCGAA AGATTTGGTT CAAGTTCCTA TCGAGGCATT CAAAAACCGA AAGCTTCAGT GTCCTGATGA CCACTTGGAG CTTTATGAGC TTGACTCTCA TTATTACAAA AGCAATGGTA AACATCAAGT TCATCACACT CACGTCTTCA GGTTCTTGGA TAAAGCGGCC ATTAAGACAA GTTCAAGAGT GTTACCATGT ACGGTAACAA AAGTGGAAGT GGCAAAGCGT GTGCTAGGAC TTATCTTTAT ATGGCTTGTC ACTTTAATCC CAAGCACCTT GTGGGCACAA GTCAACACTC TTTTCGTCAA ACAAGGGACC ACGCTTGACC GAAAAATCGG ATCCAACTTC CAGATCCCTG CGGCTTCACT GGGAAGCTTT GTTACGCTCT CGATGCTTCT CTCTGTGCCC ATGTACGACC AATACTTTGT TCCCTTCATG CGCAAGAAAA CCGGAAATCC TAGAGGGATC ACTCTACTCC AAAGGCTAGG GATAGGGTTT GCGATACAAA TTGTTGCCAT CGCGGTTGCT TCGGCCGTGG AGGTCAAGAG GATGCGCGTG ATAAGGGAAT TTCACATAAC TAGTCCGAAA GAAGTTGTGC CTATGAGCAT TTTCTGGTTG CTCCCTCAGT ACTCTCTTCT AGGCATTGGG GATGTGTTTA ACGCGATTGG TTTGCTTGAG TTTTTCTATG ATCAGTCACC TGAGGAGATG CAGAGCCTTG GAACAACGTT TTTCACGAGT GGCATCGGTC TTGGGAATTT CTTGAACAGC TTCTTGGTGA CAATGATTGA CAAGATCACG AGTAAAGGTG GAGGCAAGAG TTGGATTGGG GATAATTTGA ATGATTCGAG GCTTGATTAC TATTATGGGT TTCTAATGGT GATTTCGATA GTGAACATGG GATTTTTCTT GTGGGCAGCG ACCAAGTATG TTTACAAGAG TGATGAGACC AAAGAGTTGA GTGGAGGATG TGTTCAAATG GAGGCAAAAG CCTTCGAGAC ATCGCCTCTT AGTATCTAA 
Length1749
Protein Sequence
Protein Residue
Map Locationscaffold_4: 18744485.. 18748426
Download Sequence
A.thaliana
AGI-codeAT2G40460.1
DescriptionMajor facilitator superfamily protein
TAIR curator summary
Alias
Gene coexpression
MR
MR Locus Description
9.32738 Ahg331043 zinc knuckle (CCHC-type) family protein
18.9737 Ahg473685 TCP family transcription factor
19.3391 Ahg492115 mannose-1-phosphate guanylyltransferase (GDP)s;GDP-galactose:mannose-1-phosphate guanylyltransferases;GDP-galactose:glucose-1-phosphate guanylyltransferases;GDP-galactose:myoinositol-1-phosphate guanylyltransferases;glucose-1-phosphate guanylyltransferase
21.6333 Ahg470177 Homeodomain-like superfamily protein
25.2982 Ahg484500 chloride channel B
29.1033 Ahg493346 ERD (early-responsive to dehydration stress) family protein
29.3258 Ahg933875 Transducin/WD40 repeat-like superfamily protein
29.7993 Ahg471868 high chlorophyll fluorescence phenotype 173
32.6803 Ahg931833 arginine decarboxylase 1
33.6303 Ahg355292
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression