Detail



ID : Ahg903623

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|903623|Al_scaffold_0003_751
Sequence
ATGTCTCGTT GCTTCCCATT TCCACCTCCA GGATATGACA AGAAGATTAG AACCGAGGCA TCAGACTCTT TACTAAAGGA AAAGCACAAG GAGAAGAAGC ACAAGAAGGA TAAAGAAAAG AAAGAAGGAA AGGAGAAAAA GGATAAAGAA AAAAGCAAAG ATAAACATAA GGAACGGAAG GAGAAAAAAG AGAAACATAA AGATAGGAAA GACAAAGATC GAGATAAAGA AAAGAGTAGA ACTTCGGAGG ACAAAAAAAC TGCTGTTGCT TTGCCGAACA CCGGGGACAG AGAAAAACTT GTAACAAATA CCTTGCAGAA TAATGGTAAC GGAGAGTCTA AGTTTATACA GGACCTGGCA AGAAGGATCA GAAATGAAGA AGCTACAGAA AGTCAAAGTC CACGAAAGAT TGATTTTCCT TGTGGAGTTA CAGAGACTAA CAATTCCTGC CCAGTTCCTC AAACCAATCA TACGAAAGTT GACGAGAAGA GAAACAGTAC TCATAAAAAC TCTGCTATTT CAAAAGGGTC TGAAAATGCG GTTATCCGAG TATCATCTTG CATGGATCAG AAAGGAGCTG AGGTTAAAGT TAAACCAGTG GAGAAAAATG ATCAGGCAAG GAAAAGGGAA CTACAAGAAA AGAATCACCG CAGGGAAAGT GTGACAAAGA GTGATAAGCC ATTGGATAAT GAAGGGATAA GGAAAAGTGA ACCAAAAAAC ATAACAAATG GAAGTGGTAA AGAGAAGAAA GAGGAGAAAA CTGAGATGAT AAAGAAAAAT GTTCAGGAGA AACCAAAGTT TGTAGAGGGA GGACCCAGAT TAAAAGAGAG AGAACAAGAC GTTGTGGGTA CTAGGGATTT TAGAGAGCAG GAATTTTCAA GGGTGGGCGT CAAGAACATT ACTGCTGAGG GAATTCTTGG CAAACGAAAG GATCTTGAGA CAAATGGATT CTTGTATGAG AATGGATCTA GGAAAAACAA GATACATAAG CCAGTTGTTT CTCCTATATC ATCCGTGGAA AACGGAAGAA AGTTTGGAGC ATGCCAAACA CATCCAAAGC TTGCTTCTGA GTTGCACGAA GCGGTGTCTA ATCCAGAGGT GAAAGAGCAC AAGATTAATG GATTCATTTA TTCTCAAGAA CCCAAAAGCC ATCCACCGGT TTCTGCAGTG AAAGTAAAAA AAAACGATGA AGCATCTGCA AAGAAGCGGC CTCATTCAGA CTTAAAGTAT TTGGATCAGA TTTTGAACGT ACCAAAAAGG GAGGAATTGC ATGAGGTTGA TGATGTTGAA CAAGAATGGC TATTTGGTCA GTCAGGTGAA TTATTAAAAA AGCAAAGAGC AGATTCTGAT ACTTCACTGG TTGAGAATCC GCAAGTTTGG AACCAGGCTC TTAGAATAGA ATCTGCTGAT ATTGTAGCTC TTCCCTATGT TGTTCCATTC TAG 
Length1443
Protein Sequence
Protein Residue
Map Locationscaffold_3: 2879403.. 2882023
Download Sequence
A.thaliana
AGI-codeAT3G07280.1
Description
TAIR curator summarypseudogene of unknown protein
Alias
Gene coexpression
MR
MR Locus Description
10.0499 Ahg932721
10.3923 Ahg471143 Zinc finger C-x8-C-x5-C-x3-H type family protein
11.4018 Ahg470152
12 Ahg320107 Major facilitator superfamily protein
17.5784 Ahg910866 Protein of unknown function (DUF707)
18.7617 Ahg489303 YELLOW STRIPE like 2
21.3073 Ahg919779 branched-chain amino acid transaminase 2
23.2379 Ahg943308 glycosyltransferase family protein 28
23.8328 Ahg344726
24.1661 Ahg493193 ATP-dependent caseinolytic (Clp) protease/crotonase family protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression