Detail



ID : Ahg903647

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|903647|Al_scaffold_0003_775
Sequence
ATGATTCGTA ACACTGGTTA TTTTCTAACT GTTTTCTTCC TCGCCTTCAT TTCATTTGCA GTAACATGCA GCGGAACTAA TAAAAAAAAA GACGTAGATA GACTTTCATC AGTGCACGAA GATGTTCGGA TTGGTTTGGT GGTGGACATG GGTTCCATGG AAGGCAAGTT TGTGACAAGT TCGATTTCCA TGGCGCTTTC TGATTTCTAT AATGTCAACA CTGGCTACAG AACAAGAGTC TCTGTCTTAA CCAGAGACTC TCATGGTGAC CCTCTCCAAG CTCTCGCTGC AGCCATGGAC CTCCTGCAAA CTGAAAAAGT GGAGGCACTT GTTGGTGGAC AATCGTTGCT TGAAGCAAAA ATTTTGGCAG AGCTTGGGGA GAAAACTAAA GTTCCAGTAT TTTCTTCTTT CCAAGTTCCT AGCTCGTTGA GCTTGACCAA ATATAATTAC TTTATTCAAG CTACGCATGA TACATCCTCT GAGGCAAAGG GAATCGCAGC TCTATTCAGC AATTTTGATT GGAGAACCGC TGTTCTTATC TACGAGGATT ATGATGACTG GAGAGAGAGT ATACAACCTT TGGTTGGACA TTTCCAACAG AACGCCATTC ACATTGAGTA CAAGGCGGAA TTTTCGGTCT CATCTAATGA GGAATGTATC ATGAAGCAGC TAAGAAAGTT AAAGGCCTCT GGGATAAGGA TTTTTGTTGC GCACATTTCT GAACAAATTG CAAATCGTCT CTTTCCATTT GCTCGGAGGT TAGGAATGAT GGAGGAAGGA CATGCTTGGA TCCTCACAGC GAGAAGCATG AATAATTTTC AAGACACAAA CTATTTAGCA AAGGAGGCAA TGGAAGGTGT GATTGGTTTC AAGTCTTATA TTCCATTGAC TGAGGAGCTT CACAACTTTA CTTCGAGATG GAAGAGATCT TTGCGACTCG AAGAAGTAGT TACAGGGATG AGCGTTTGTA GCACATGGGC TCACGATATA GCTTGGAGTC TTGCAAGAGC AGCAGGAGTT GCAAAGTTAC CAGGTTTGCC AGTATATAAC CTGCTTGAGG CAATTACAGA GGGTGCTAAG CATAAAGGTT TGAGTGGTGA CATGAAATTC ATCGATAAGA AGTTTATCTC AGACAAGTTT GAGATTGTGA ATATGATAGG GAGAGGTGAG AGAAGTGTAG GACTTTGGGA TTCTGGTAGT TTCATCAGCA ACAGAAGAAG ACGATTGTCT TCTACCAATG CACTTGAGAC AATCATCTGG CCTGGAGGGT CTACAAGAGT TCCAAAAATC CGTTCGTTGA AAGAGAAGAG ACATGGTAAA AAGAAGAAGC TGAGAGTTTT AGTACCAGCG GGAAACATAA ATCCGCAAAT ACTGGAAGTG AAAACAGATT TAAAAACTGG AGTCACGGCT GCTACAGGTT ACTGTATTGA AGTTTTTGAG ACATCAATTC TACCTTTCAA TTATGAAGTG GAGTACATAC CTTGGCCTGG TGCAATTAAC TACAAGAACT ACAACGATCT TCTCTACACA CTGTATAGCC AGAAAGACAA GTACGATGCA GCTGTTGGGG ATATCACGAT TACTGATAAC AGATCTTTAT ATGTAGATTT TACATTACCT TTCACTGATA TGGGTCTCGC AGTTGTGACT GCCAAAGACA AAAGCATGTG GATTATCTTT AAGCCTTTGA CACTTAGTCT TTGGCTAACA ATTGCAACTT TCTTTATCTT GACGGGGGCT ATAGTTTGGT TGATAGAGCG GCATGATAAC ACTGACTTCC AAGGCTCTTG TTTCCAACAG ATTGGAACAT TGCTATGTTT TGGGTTCTCG ACCCTTGTCT TTGCCCATCG GGAGAGGCTA CAACATAATA TGTCAAGATT TGTAGTTATT GTTTGGATAT TTGCAGTGCT TATATTGACT TCAAATTACA CTGCAACGTT GACATCAGTG ATGACGGTTC AACAGATACG AGGGTTGAAA TCAAACGAAA ACATTGGCTT CTTTTCTGCC TCTATAGCAG CAAATGTGGT TAATGAGAAT CCTACGTTCC AAGGACCTAG ATACAAGGGA TTAAAGACAG CTGACGATTT TACAAATGCT TTAAGGAATG GAACTATCTC GTTCATCGTC GATGAAGTTC CATATGTAAA GCTCTTTGTT GCAAAACACC CTTCAGAATT CGAAATTGTC AAAACCGAAA GCGTCACCAA CGGCTTTGGA TTTGCTTTCC AGAAAGGTTC TCCTTTGGTT CAGAAGGTGA CAAGAGAAAT CGCAAAGCTA AGAAGAACAG AGAAGCTAAA AGCCATAGAG AATTGGTGGT TCCAGAGACA AACGACGTCA GCCACAAGCG AGGATACGTT CCATCCTCTC ACAGTTTACG CGGTTTGTTT ATGA 
Length2394
Protein Sequence
Protein Residue
Map Locationscaffold_3: 2969566.. 2972538
Download Sequence
A.thaliana
AGI-codeAT3G07520.1
Descriptionglutamate receptor 1.4
TAIR curator summarymember of Putative ligand-gated ion channel subunit family. Contains a functional cation - permeable pore domain. Involved in cellular cation homeostasis.
Alias[ATGLR1.4][GLR1.4][glutamate receptor 1.4]
Gene coexpression
MR
MR Locus Description
40.3609 Ahg943129 Copper amine oxidase family protein
53.0848 Ahg900074 Protein of Unknown Function (DUF239)
60.918 Ahg921319 T-complex protein 11
67.5056 Ahg922740 Protein kinase family protein with leucine-rich repeat domain
77.3175 Ahg933139 Leucine-rich repeat protein kinase family protein
77.6209 Ahg471476 autoinhibited Ca2+/ATPase II
79.1707 Ahg930437 AMP-dependent synthetase and ligase family protein
99.3982 Ahg480822 heavy metal atpase 4
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression