Detail



ID : Ahg903991

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|903991|Al_scaffold_0003_1119
Sequence
ATGCCCAAAT CCAATGATGC CGATGTCGCA GAATCTGAAG CCGTTCCGTT GCTCGATCTT GCCAAGCCGT CGTTACCTAT ATCTTTCCCG ATCAAATCTC TTCAAGATCT GAAATCTCGT TCTTACTTCG TTTCCTTTCA CTTCCAGTTT AATCGCTCCA CCGTACCTCT CCGGCGAGAC TCCGATGACT TACCGAATCG CCCAAGGGTT TTAGTCTGCC ATGACATGAA AGGAGGGTAT GTAGATGACA AGTGGGTACA AGGATGTGAA AACGACGCCG GATTTGCGAT TTGGCATTGG TATTTGATGG ACATTTTTGT TTACTTCTCT CATTCTTTGG TCACTCTTCC TCCTCCTTGC TGGACTAACA CTGCTCATAG GCATGGTGTT AAAGTATTGG GGACTTTCAT CACAGAATGG GATGAAGGTA AAGCTACCTG CAAAGAGATG CTTGCCACAA AAGAGTCTGC TCAGATGTAT GCAGAGCGTT TGGCAGAACT TGCTACTGCT CTTGGCTTTG ATGGGTGGCT GATTAATATA GAGAATGATA TAGATGAGGA GCAGATTCCA AATTTGAAGG AATTTGTAAG CCATCTAAAA AAAGTCTTGC AAAAAAAGTC TTGCATTTAT CTACACCTGG GGCGTTGGTA TGACAGTGTC ACTATTCATG GTAATCTTCA ATGGCAAGAT CAATTGACTG AGCTGAACAA ACCTTTCTTT GACTTATGCG ATGGAATATT CATGAACTAT ACATGGAAGG AGAGCTACCC AAAACTATCA GCTGAAGTTG CCGGGGACAG AAAGTTCGAC ATCTACATGG GAATTGATGT CTTTGGCCGG GGCTCTTTTG GTGGTGGGCA ATGGACTGTA AATGCTGCTC TTGATTTGCT GAAGAGAAGC AATGTGTCAG CTGCCATGTT TGCTCCTGGA TGGGTTTATG AGACTGCACA ACCCCCCAAT TTTCATACAG CTCAGAATAA ATGGTGGTCA ATTGTCGAGA AGTCATGGGG AATAGTCCAA ACTTATCCAC AAGTCTTGCC TTTTTACTCG GATTTCAATC AGGGCTTTGG TTACCATGTT TCACTCGAAG GTCGCCAACT GTCAGATGCT CCATGGTACA ACATATCTTG CCAAAGTCTT CAGCCTCTCT TAGAATTCAA TGAAGAAGAC AACAAAGATA TCATCCACGT CACTGTTGAC AAAAAGGGAA AAATGTTTTT GACAATTCTG AGCAAACATT TAAACAATTA CTATGAATTT GATAGTGCTC GAGAGGCATC TTTTAACGGA GGAGGGAACA TCGCTTTTAG AGGAAAACTC AAGGGATATG CGTATTTCAC AACAAGGCTC TTCAAACCCC ATCTTCAGCT TTCATCTTCC CCCATCACAA TCTCCTACTC TGTGAAATCA GATGAAACCT CTAAACTTGG AATCCTGCTT TCTTTCTCAT CTCCATCACA GGAGACGAAA TCCATTCTCG TTGCCCCACA AGATTCCATC CGTAGATTCA ACGACATGTT CTCACAGTGT CTCGCCACAT CAGCGCAGAC TGTATCCGAG TGGACGGTAC ACGAGACAAG CCTTGTCATG GATGGTCACA CACTGACTGA AATCTCTGCC TTTTGCTACA GACCAGATAA TTCGACAAAG AGTGCAGAAT ATGTTGCATT GCTGGGACAC ATATCAATCA AAGATCATGT TCAGTCCCAG CAGAAACCCG AGACTTTACT TCCAGCATCA CCGTGGGTCA TCGAAGCTCA TAACATAGAG CTTGTACAGG GTAATTCTGG TTCTAAGAGC CTCAGGGTTA AGCTAGAATG GAGACAGAAA GACCTTGAAG ATTCTGCATT CCCAAAGTAC AATGTGTATG CAGAGAATGT GAAGTCGACT GATCTAAGAT CGAGGAAGGT GCTAGAGAAA CCGATAAGTG AGACAGTGTT CCTTGGAGTC GCTCACGTAC CAGCCTATTA CGTAGGGGAA CTGGTGGTAG AATCAGACGT GAAAGGAGTC CGCTTCGTAG TTCAAGCCTG TGGCAAAGAT GGTTCATGGG CCAAGTTGTA TTATTCCCCT AAGCTTCTAG TTGAACTGGA AGGTCTCTCG TTTCAAGATT CGTCGTAG 
Length2118
Protein Sequence
Protein Residue
Map Locationscaffold_3: 4176909.. 4180131
Download Sequence
A.thaliana
AGI-codeAT3G11040.1
DescriptionGlycosyl hydrolase family 85
TAIR curator summary
Alias[AtENGase85B][ENGase85B][Endo-beta-N-acetyglucosaminidase 85B]
Gene coexpression
MR
MR Locus Description
5.65685 Ahg484397 N-terminal nucleophile aminohydrolases (Ntn hydrolases) superfamily protein
12.3288 Ahg473787 sequence-specific DNA binding transcription factors
16.1245 Ahg939118 ARM repeat superfamily protein
18.9737 Ahg490411 ABC transporter 1
21.2368 Ahg487428 RNA binding (RRM/RBD/RNP motifs) family protein
24.0832 Ahg481207
28.9828 Ahg478692 Tetratricopeptide repeat (TPR)-like superfamily protein
29.1548 Ahg938964 Far-red impaired responsive (FAR1) family protein
30.133 Ahg355042 pleckstrin homology (PH) domain-containing protein
31.1288 Ahg940355 DEA(D/H)-box RNA helicase family protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression