Detail



ID : Ahg904725

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|904725|Al_scaffold_0003_1853
Sequence
ATGGCAAGCA CCAATGTTAC AGGGCAATGC CCGGGTCCGA TGAAGGCAAC CTCTAATGGA GCCTTCCAAA ACGAAAGCCC TCTTGATTTC GCGCTCCCTC TGATCATCCT ACAAATCGTC TTGGTGGTTG TGTTTACAAG GCTCTTAGCT TACTTTCTTA AACCTCTCAA ACAGCCCCGA GTCATTGCTG AGATCATTGG AGGGATACTG CTTGGACCTT CTGCACTAGG ACGAAGCAAG GCCTATCTTG ACACTATCTT CCCAAAGAAG AGCTTGACCG TTTTAGACAC ACTCGCCAAC ATCGGTCTTC TGTTTTTCTT GTTCCTAGTT GGGCTTGAGC TTGACTTTAC AGCGATCAGA AAAACCGGAA AGAAATCACT ATTGATAGCC CTAGCTGGGA TCTCACTTCC TTTTGTAGTG GGTGTAGGCA CATCTTTTGT TCTCAGTGCC ACCATAAGCA AAGGAGTCAA TCAGCTTCCT TTTATTGTCT TCATGGGTGT TGCCTTATCA ATCACTGCCT TCCCTGTGCT TGCTCGTATC CTAGCTGAGC TTAAGCTTCT AACAACTGAC ATTGGACGTA TTGCAATGTC TGCAGCGGGA GTAAACGATG TTGCAGCTTG GATACTCCTT GCGCTTGCTA TTGCTCTCTC AGGAGATGGG ACTTCTCCTC TGGTATCTGT TTGGGTTCTT CTCTGTGGAT CTGGATTCGT GATCTTTGCA GTTGTGGCAA TCAAACCTCT GCTTGCTTAT ATGGCTAGAC GCTGTCCTGA GGGAGAGCCT GTGAAGGAAC TCTATGTTTG TGTCACTCTA ACCGTGGTTT TAGCAGCAAG CTTTGTGACA GACACTATTG GGATACACGC GCTGTTCGGG GCGTTTGTGG TAGGTATAGT AGCTCCTAAA GAAGGACCAT TTTGCAGGAT TTTGACTGAG AAGATAGAGG ATCTTGTCTC GGGGCTTCTT CTACCTCTGT ATTTTGCGGC TAGCGGTCTG AAAACTGATG TAACAACGAT CAGGGGAGCA CAGTCATGGG GACTTCTAGT TCTTGTCATA CTCACCACTT GTTTCGGGAA GATTGTAGGA ACCGTTGGTG CCTCGATGCT CTGCAAGGTT CCTTTCAGAG AAGCCATGGC ACTTGGATTC CTCATGAACA CCAAAGGTTT AGTAGAGCTC ATTGTTCTTA ACATTGGCAA GGACCGGAAG GTGCTGAATG ATCAAGCGTT TGCGATCTTA GTTCTAATGG CATTGTTCAC AACCTTCATC ACAACTCCAA TTGTGATGCT TATTTACAAG CCTGCAAGAA AAGGAGCACC GTACAAGCAC AGAACCATCC AAAGAAAAGA TCATGATTCT GAGCTAAGGA TACTTGCTTG CTTCCACAGT ACCCGCAACA TCCCCACATT GATCAATCTG ATCGAATCAT CAAGAGGAAC AGGCAAAAAG GGACGCCTCT GCGTTTACGC GATGCATCTA ATGGAGCTTT CTGAACGTTC ATCAGCAATT GCTATGGTTC ACAAAGCTCG GAACAATGGT CTCCCAATCT GGAATAAGAT CGAGAGATCA ACGGACCAGA TGGTGATTGC GTTCGAGGCG TACCAGCATC TACGAGCAGT AGCGGTTAGA CCCATGACTG CAATATCTGG TCTCAGCAGC ATCCACGAGG ACATATGCAC AAGTGCGCAT CAGAAACGAG TAGCGATGAT ACTGCTTCCG TTTCACAAGC ATCAGAGAGT GGACGGAGCG ATGGAGTCAA TCGGACATGG GTTCCATGAA GTGAACCAAC GGGTCTTACA ACGAGCTCCT TGCTCAGTCG GGATTCTTGT GGACAGAGGA CTCGGAGGAA CCTCACAGGT TGTAGCCAGC GAAGTGGCTT ACAAAGTCGT GGTTCCATTC TTTGGAGGCC TCGATGATCG AGAAGCTCTC GCGTACGGGA TGAAAATGGT GGAGCATCCG GGAATCACAC TAACTGTTCA CAAATTCGTA GCTGCGAGAG GAACATTGAA GAGATTCGAG AAGAGTGAAC ACGACGAAAA GGAGAAAACA GAGAAAGAGA CTGACGAAGA GTTTGTGAGG GAGTTGATGA ATGATCCAAG AGGAAATGAG TCATTGGCTT ACGAGGAAAG AGTTGTTGAG AGCAAAGAAG ATATCATCGC GACACTTAAA TCGATGAGTA AATGCAATCT CTTTGTCGTG GGAAGAAACG CAGCTGTTGC ATCGTTGGTT AACAGTACGG ATTGTCCAGA GTTAGGACCA GTTGGACGTT TGTTGTCGTC GTCGGAGTTT TCCACCACCG CGTCGGTCCT CGTCGTTCAG GGATACGATC CAACGGCCGA TACACGACCG CTCGTAGAGG AAGATGAAAG TTACGAACAG GCTTCCAGAG ATATTTCTGA CTCAACCGTC TGA 
Length2403
Protein Sequence
Protein Residue
Map Locationscaffold_3: 7082233.. 7084807
Download Sequence
A.thaliana
AGI-codeAT3G17630.1
Descriptioncation/H+ exchanger 19
TAIR curator summarymember of Putative Na+/H+ antiporter family
Alias[ATCHX19][CHX19][cation/H+ exchanger 19]
Gene coexpression
MR
MR Locus Description
17.7482 Ahg335523 cellulase 5
23.5584 Ahg476401 P-loop containing nucleoside triphosphate hydrolases superfamily protein
24.8596 Ahg483772 BCL-2-associated athanogene 6
25.219 Ahg311923 F-box family protein
25.7876 Ahg929301 RING/U-box superfamily protein
31.241 Ahg910877 F-box and associated interaction domains-containing protein
34.641 Ahg470756 RNA-binding (RRM/RBD/RNP motifs) family protein
37.0405 Ahg470286 Bax inhibitor-1 family protein
50.1597 Ahg493150
58.4808 Ahg495093 Protein kinase superfamily protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression