Detail



ID : Ahg905911

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|905911|Al_scaffold_0003_3039
Sequence
ATGGCTTTGG TGGGGCTCCA TGCAGCCACC GTTGACATGG AGTTTATAGG AGTTGAAGAT AGCGGGGACC GGGAGGATAA ACAAATCGCA GTTAGTATCA TCTCTTCAGG GAAAAATGCT GATAAAACCG AAGATCCGGA TTCCTTGATA TTTACGGGGT TTGGTGGTAC GGACAAGTAA CATGATCAAC CATCTGATCA GAAACTTGAG AGGTTGAATA TTCCACTAGA GGCAGCTTTT CGGAAGAAAA GTATTGTGAG AGTGGTTAGA GGTATGAAGG ATGAGAAGAG GACACATGGT AATGTTTACA TATATGATGG AACATATATG ATTACTAATA TGTGGCAAGA GGAAGGTCAA AATGGGTTCA TTGTGTTCAA ATTCCAATTG GTTAGAGAAC CTGATCAAAA ACCCGCTTTT GGTATATGGA AATCAGTAAA AAATTGGAAG AATGATTTGA GTACAAGACC AGGTCTTATT CTTCAAGATC TCTCTAATGG AGCTGAGAAT CTAAAGGTTT GTGTGGTGAA TGAAGTTGAC AAGGAGAATG GTCCTTCTTT GTTTACTTAT GTCACTTCGC TGCACCATGA GGTAATCAAT ATTCGACCGA TGGTTGATCC TTGCGCTTGT GGACGTAGAT CATGTGGTCC AAAAAGTGTC TTTGAGAATA TTAGTGTTTC ATCATCATTG GTGATTAGTG CAAAGAAGTC AGGAAATGTG GCTCGATTTA TGAACCATAG TTGCTCACCC AACGTTTTTT GGCAGCCGAT TTCTCGTGAA GAAAATGGTT TATGGTGTCT TTACATTGGC TTTTTTGCAA TGAAACATAT TCCTCCATTA ACGGAGTTGA GATATGATTA TGGAAAATCT AGAGGAGGTG GGAAGAAGAT GTGTCTATGT AGATCAAAGA AATGTTGTGG TTCTTTTGGA TAA 
Length933
Protein Sequence
Protein Residue
Map Locationscaffold_3: 13491484.. 13492782
Download Sequence
A.thaliana
AGI-codeAT2G05900.1
DescriptionSET domain protein 11
TAIR curator summaryPredicted to encodes a SU(VAR)3-9 homolog, a SET domain protein. Known SET domain proteins are involved in epigenetic control of gene expression and act as histone methyltransferases. There are 10 SUVH genes in Arabidopsis and members of this subfamily of the SET proteins have an additional conserved SRA domain.
Alias[SDG11][SUVH10][SET domain protein 11][SU(VAR)3-9 HOMOLOG 10]
Gene coexpression
MR
MR Locus Description
23.2809 Ahg358371 Pectin lyase-like superfamily protein
28.931 Ahg887895
32.0624 Ahg341194 Homeodomain-like superfamily protein
34.2345 Ahg480132 cytochrome P450, family 705, subfamily A, polypeptide 18
41.2068 Ahg936150 F-box family protein
48.1664 Ahg951842 Galactose mutarotase-like superfamily protein
49.1427 Ahg475725 Subtilase family protein
49.5177 Ahg352619
54.074 Ahg937786
57.2364 Ahg951864
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression