Detail



ID : Ahg906318

Blast(Query) A.halleri   /   A.thaliana (NOT RECIPROCAL)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|906318|Al_scaffold_0003_3446
Sequence
ATGGAATCTG TAGAAGCCGT AGAGAAGATC TTAAACTACA CTTTCACTGA CAAGAATCTT CTCAAAGAAG CTATAACAAA AACCTCTGGT GGTAATATTG AATCATCGTC TTTATTATTC GAACGACTTG AGTTCCTCGG CGATTCAGTT CTTCTAGTCG TCTTCTCCAA TCACATCGAA ATCACTTACC CTAATCTCCA TCCCAACGAT TTAAACGATG TACGAATTGC AAACGTAAGT AACGAGACTT TCGCTCGTAT CGCCGTCAAC AACAACCTCC ACCAATTCAT TATATTCGAC GCTCCAAATC CTCTTCTACA TAAAATGTCA CATGTTCTTA CCAACAAGTG GTGTCATGTC TTAAAGATTA AAGATTTCTC AGAGGCGGTG AAGGAAGAAG TTGATCCAGC TCCGTGTGGT GGATTGGTGA AAGCTCCAAA ATTTCTTGCT GATCTTGTGG AAGCAATAGC TGGAGCTGTT TATATTGATG TGGATTTTGA TGTGCAAAGA GTTTGGGAGA TCTTTAGGGT TCTTGTGGAG CCAATATGTA CATTGGATGA TTTACGGAAG CAACCTGAAC GAACATATCT TAGGCTTTTA GGTTTGGGTG ATAAACTCGG AAAGAGAATC GAAGTCTTTT TTGAGGAAGA AGGAGGGCCA AAAATTGAGC AGAAATTTGT TTGTTCAGTT AATATTGAGA TCCCATCTGT AGAAAGTATC TTTCACATGA AGGGAGATGC AAAATCAACG AAAACGCAAG CACAAAACTC CTCCGCCTAC CATATGATAG GAGCCTTGAA ATCTTCACTA ATGAGTCATG TCAAAAGTAA TCTGCCAATA GAGAAAAGTT TAGATGAGAA AATCTCCTCT AATATTGAGA TCCCATCTGT AGAAAGTGTC TTTCACATGA AGGGAGATGC AAAATCAACG AAAAAGCAAG CAAAAAACTC CTCCGCCTAC CATATGATAG GAGCCCTGAA ATCTTCACTA ATGAGTCATG TCAAAAGTAA TCTGCCAATA GAGAAAAGTT TAGATGAGAA AATCTCCTCT AATGAGTCTT GCCTGCCACA TGAAAGGAGC CTTGAAATCC TCAGCTCAGA GATTGATTCT GATTCAGTGA AAGCTGTGGA GAAGATCTTG AATTACAGTT TCACTAACAA GAATCTTCTG AGAGAAGCGC TAACACACAA CTCTTCTAAC TTACTGCCAT TTCAGCGGCT TATGTTCGTC GGCAAGGCGG CTATTTCTCT CGCCTTCGCG AATCACATGT ACCTCACGTA CCCTAAGCTC AGACCAAAGG AGTTGACTAT GTTGCAAAAT GCAAATACAT GTAACGACAG ATATGCTCGT GTTGCTGTCA AGCGCGGCAT CTACCAATTC CTTAAAACCA ATGTTCCTAC ATCAAAAAGA CAGATTATCG AGTTCATAAA GATGATGGGC AAAGAAGATG ACCCAGATCC ATTCAGATCT GTGAAAGCCC CAAAAATACT CACTGACCTT GTAGAATCTG TAGCTGGAGC TGTGTATATT GATGTGAATC GTGATGTTAA AAGACTCTGG GAGATCTTGA GGGGTCTTTT CGAGCCAATA TGTACACTTG ATGATTTACG GCGGAAACCT CATCCACTTC TTACCCTTTT TTGTTTGGGA TATAAACACG GCAAGCGAAT CGAGTTCAAG TATCGTGAGT GTGAGAAGAG TTCAGGTATC AACGAAGCCA CTATTACTGA GGTATATGTC GATGATAAAT TTATAGCTTG TGGGAAGAGT TGTAATAGAG CTGCCTCAAA GATGAGAGCT GCTACGATGG CGTTACAGAA GTTGTCAGAA AGTATGCCCA TTGAAATGGT TATGAATGAC AGCATTGAAT ATGAAGATTC AAAAAAGACG TTGATTGAGA TTTGCAACGA GAGAAAGTGG CCGAACCCGA TTTTCAGTGT TGAGAGGTCT AGTAAAGGAT TTGTTTCTTC AGTTACGATT GAGACTCCAA CTGAAGAAGG TACCTTATAC ATCGAGGGTG ATTTGGAAAA AGGGAAAGAG AAAGCAGAAT ACAACGCAGC CTCTCACGTG ATAAGAACTC TGAAATCTTC TCCATTGGGT CTTGTCGTAA GGAATCTGAA GAGGAAGCAG CTAAGTTTAG ATGAGGAAGA GATTGTTGTC AAAGAAAATA AAGATGAGGA AGAGATTTTG CATCGAAACA AGAGGAAGAG GAGAAGGCGA TGA 
Length2223
Protein Sequence
Protein Residue
Map Locationscaffold_3: 19193740.. 19197055
Download Sequence
A.thaliana
AGI-codeAT5G45150.1
DescriptionRNAse THREE-like protein 3
TAIR curator summary
Alias[RTL3][RNAse THREE-like protein 3]
Gene coexpression
MR
MR Locus Description
9.59166 Ahg477936 DNAJ heat shock N-terminal domain-containing protein
18.1659 Ahg471841 S-adenosyl-L-methionine-dependent methyltransferases superfamily protein
22.8035 Ahg479390
23.1084 Ahg476926 P-loop containing nucleoside triphosphate hydrolases superfamily protein
24.2074 Ahg355725 RNA-binding (RRM/RBD/RNP motifs) family protein
25.0599 Ahg479567
25.6905 Ahg473284 Actin-like ATPase superfamily protein
27.6043 Ahg896342 coenzyme Q biosynthesis Coq4 family protein / ubiquinone biosynthesis Coq4 family protein
28.8617 Ahg488513
32.4962 Ahg485225 DEK domain-containing chromatin associated protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression