Detail



ID : Ahg906606

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|906606|Al_scaffold_0003_3734
Sequence
ATGATGATTG CTCGTTTTGT GCTCAGCATT CTGATCGTAG CGGCCATAGT TTCTGGTAGT GAGTTTTCTA ATACTCGTGA TGCAAAAGTA GAAAAAATCT TAAAGAAACT CAACAAACCT GCTCTTAAAT CTATCAAGAG TCCAGATGGA GATATAATAG ACTGCGTTCA TATGAATAAT CATCCAATTT ATGATCATCC TTTATTCAAA AACTACACAA TTCAGATGAA ACCAAGTTCT TACCCTAAAG GTCAAAATAA TGAATCTTCA GAGAGAGAGA AACAAAGTGT TGTGACTCAA CTATGGACAG TTAACGGGAA ATGTCCCGAA AACAGTATTC CGATCAGAAG AACGAGAAGA AAAGAAATTT TACGAACCAA ATATATGCAA AGATACGACA AAAAGAATCC AAACATAATA AATCATACTA AAGCATCAAC TAGTAACTCC ATACATGAGT ACGCCCAAAT CCAAGCGAAA GGAAAGTTTC ATGGAGCCCA TGCGGATATA AATGTTTGGA AACCTTATGT ACAAACACCA AAAGAGTTTA GCCTAGCACA AATGTGGGTT ATGGCTGGTC CGTTTTCTGA AGTTAATAGC GTTGAAGCTG GTTGGCAGGT GTATCAAGAT CGTTACGGCG ATGACAACCC AAGATACTTT ATTTTTTGGA CTGCGGATGG GTACCACTCA GGCTGTTACA ATCTTGATTG TCCAGGATTT GTTCCTGTCA GCCAAAACTT TGCCCTAGGT GCAGCCGTTA GTAATGTTTC CACCTTGAAT GGTCAACAAT ACCACATTCC CACAACTATA TGGAAGGATC CACATACAGG GAATTGGTGG TTAAAATTTA ATGACCATGA ATTTGTCGGA TATTGGCCTT CCATATTGTT CAACCATCTA AAAGATGGTG CGACCGAAAT TCAGTGGGGA GGTGAAATAA TAAACTTTAA AGATGGTTCA CTTCACACGA CGACGCGAAT GGGGAGTGGA CATTTTGCAG AGGAGGGATA TCAAAAAGCT AGTTATTTCA AGAATCTTGA GATAATTGAT GAACATGATA TTCATAATAA ACCTAAAGAA GGTTATTCTT ATATGACGCA AGAGAGTTGT TATAACATCA GGTCTGGCTA TGCTAAGATA TGGGGAGTTT ATTTTTATTA TGGTGGCCCA GGTCGAAATC AGAATTGTAA ATAA 
Length1194
Protein Sequence
Protein Residue
Map Locationscaffold_3: 20981650.. 20983592
Download Sequence
A.thaliana
AGI-codeAT2G17750.1
DescriptionNEP-interacting protein 1
TAIR curator summaryIntrinsic thylakoid membrane protein that fixes RPOTmp on the stromal side of the thylakoid membrane.
Alias[NIP1][NEP-interacting protein 1]
Gene coexpression
MR
MR Locus Description
26.9444 Ahg937876 TRAF-like family protein
26.9444 Ahg943361 TRAF-like family protein
31.7648 Ahg949435
35.1568 Ahg486196
49.7896 Ahg907155 arogenate dehydratase 5
66.8132 Ahg951554
69.7424 Ahg359456
78.0385 Ahg942227 Putative membrane lipoprotein
78.5875 Ahg933385
79.0949 Ahg936005
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression