Detail


ID : Ahg908193

Blast(Query):  A.halleri   /   A.thaliana (NOT RECIPROCAL)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|908193|Al_scaffold_0002_1274
Sequence
ATGGAGAAGA CCCTTACTTG TTTAGCAGCA ACAACTTCGT TGGACGTCAA ACATGGGAGT TTGATCCTGA AGCCGGCACA CCGGAGGAAC GAGCTGCTGC CTGTCGAAGA AGCTCGCCGT AGTTTCTTAG TCAATCGTTC ACGTGTTAAA GGCTGCAGTG ATCTCTTGTG GCGAATGCAA TTTTTGAAAG AGGCAAAATT CGAGCAAGTT ATCCCGCCGG TGAAGATTGA CAACGGCGAA GGCATAACAT ATGAAAATGC GACTAATGCG TTAAAGAGAG GAGTCTCTTT CTTCTCGGCG TTACAAGCCT CCGACGGTCA CTGGCCAGGA GAAATCACCG GACCTCTCTT CTTTCTTCCT CCATTGGTAT TTTGTCTGTA TATCACAGGA CACCTTGAGA AGGTATTCGA TGCAGAACAC CACAAAGAGA TGTGTCGACA TATCTATTGT CATCAGAACA AAGATGGTGG ATGGGGATTA CACATTGAAA GCAAGAGCGT TATGTTCTGC ACCGCACTTA ATTACATATG CTTGCGTATT CTTGGAGAAG GTCCTAATGG AGGACAAGAT AACGCGTGCA AACGGGCCAG GCAATGGATT CTTGACCATG GTGGTGTGAC TTATATTCCT TCTTGGGGAA AAATTTGGCT CTCGATACTT GGAATCTATG CTTGGTCTGG AACAAACCCG AGGCCTCCCG AGATCTGGTT GCTGCCTTCT TCCATTCCAA TACATCTAAA AATATTGTGT ATAACCCGAA TGGTTTATAT GCCCATGTCT TACCTATATG GGAAAAGATT TGTTGGTCCT CTAACACCTC TTATCATGCA ATTGCGCGAG GAACTCTACT TACAACCTTA TGAAAAAATC AATTGGAACA AAGCGCGCCG TCTATATGCA AAAGAAGACA TGTTTTATCC TCATCCTTTG GTTCAAGATT TGATATGGGA CACTCTTTAC ATTTTTATGG AGCCTTTTCT TACAAGTTGG CCGTTAAACA AGCTTGTAAG GGAAAAGGCT CTTCGGCTGG CAATGGAGCA CATACATTAT GAGGACGAAA ATAGTCATTA TATTACCATC GGATGTGTTT TGTGCATGCT TGCTTGCTGG ATTGAGAATC CGAATGGAGA GCACTTTAAG AAACATCTTG CTAGAATTCC AGACTTTATG TGGGTAGCTG AAGACGGACT GAAAATGCAT AGCTTTGGAA GTCAACTTTG GGAGACCGGG TTTGCAATTC AAGCTTTACT TGCTAGTGAT CTTTGTGATG AAACTGATGT CGTACTTAGG AAAGGACACA ATTACATTAA AAATTCTCAG GTTAGAGAAA ACCCTTCGGG TGACTTCAAA AGCATGTATC GCCACATTTC CAAAGGAGCA TGGACTTTGT CTGATCGAGA TCAAGGATGG CAAGTTTCAG ATTGTACAGC TGAAGCTTTG AAG
Length1443
Protein Sequence
Protein Residue
Map Locationscaffold_2: 11009203.. 11011923
Download Sequence
A.thaliana
AGI-codeAT1G78960.1
Descriptionlupeol synthase 2
TAIR curator summaryEncodes a multifunctional 2-3-oxidosqualene (OS)-triterpene cyclase that can cyclize OS into lupeol, alpha- and beta-amyrin.
Alias[ATLUP2][LUP2][lupeol synthase 2]
Gene coexpression
MR
MR Locus Description
5.2915 Ahg887559 N-terminal nucleophile aminohydrolases (Ntn hydrolases) superfamily protein
6.85565 Ahg333980
11.5758 Ahg952134
14.3875 Ahg942632
16.6132 Ahg925029
20.1742 Ahg889070
20.347 Ahg487715 IBR domain-containing protein
33.1662 Ahg907281 Defensin-like (DEFL) family protein
34.176 Ahg900212
36.8782 Ahg496889 basic helix-loop-helix (bHLH) DNA-binding superfamily protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression