Detail



ID : Ahg909901

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|909901|Al_scaffold_0001_155
Sequence
ATGGTTTTGC CATCTTCAAC ACCGTTACAA ATCACCGGAA AGAAGACGAA ATCCTTACCG GAATATAGCT TTCCGGTGAT CGATTTCTCC TTAAACGATC GGTCAAAACT ATCGGAGAAG ATCGTAAAAG CCTGTGAGGT TAATGGGTTT TTCAAGGTGA TAAACCACGG AGTTAAACCG GAGATAATAT CGAGATTCGA GCATGAAGGA GAAGACTTCT TTGATAAACC GGAATCGGAT AAGCAACGAG CCGGTCCGGC GAGTCCTTTC GGTTACGGAT GCAAGAACAT CGGCTTCAAC GGCGATTTGG GTGAGCTTGA GTATCTTCTT CTCCACGCAA ATCCGACAGC TGTCGCTGAT CAATCTGAAA CTATATCTCA TGATGATCCT TTCAAGTTCA GCTCGGCGAC GAATGATTAC ATACGCGCGG TTAAAGATTT GGCATGTGAG ATCATTGACC TGACGATCGA GAATTTATGG GGACAGAAGT CTAGTGAAGT CAGTGAGCTG ATCAGAGACG TTCGTAGCGA TTCGATCCTA CGGTTGAATC ACTATCCACC AGCACCGTAC GCGTTAAGAG GCGTTGGTCA AATAGGTTTC GGAGAGCATT CTGACCCTCA GATCTTGACG GTGTTAAGAT CCAACGACGT AGATGGACTT GAGATTTGCT CACGTGACGG CTTGTGGACC CCAATCCAGT CTGACCCTAC ATGCTTCTTC GTATTGGTCG GTGACTGCCT TCAGGCATTG ACGAATGGGA GATTCACTAG CGTGAGGCAT AGGGTTTTAG CAAACATAGC AAAGAAGCCA CGTATGTCGG CAATGTACTT TGCAGCGCCA CCGTTAGAGG CGAAAATATC ACCGTTGCCA AAAATGGTGT CGCCAGAAAA TCCAAGACGG TATAATTCAT TCACATGGGG TGACTACAAA AAAGCTACAT ACTCTCTCCG TTTAGGTGTC CCTCGTCTTG AGTTCTTCAA GACTTTATAG 
Length990
Protein Sequence
Protein Residue
Map Locationscaffold_1: 572193.. 574629
Download Sequence
A.thaliana
AGI-codeAT1G02400.1
Descriptiongibberellin 2-oxidase 6
TAIR curator summaryEncodes a gibberellin 2-oxidase that acts on C19 gibberellins but not C20 gibberellins.
Alias[ATGA2OX4][ATGA2OX6][DTA1][GA2OX6][Arabidopsis thaliana gibberellin 2-oxidase 4][ARABIDOPSIS THALIANA GIBBERELLIN 2-OXIDASE 6][DOWNSTREAM TARGET OF AGL15 1][gibberellin 2-oxidase 6]
Gene coexpression
MR
MR Locus Description
1 Ahg476823 calmodulin-like 38
2 Ahg927573 Calcium-binding EF-hand family protein
2.44949 Ahg471689
3.16228 Ahg949754 Integrase-type DNA-binding superfamily protein
4.89898 Ahg486595 BON association protein 1
5.91608 Ahg495276 MATE efflux family protein
8.3666 Ahg485210 cytochrome P450, family 94, subfamily B, polypeptide 3
11.9583 Ahg337336 Leucine-rich repeat protein kinase family protein
12 Ahg477526 ARM repeat superfamily protein
12.49 Ahg479838 myb domain protein 15
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression