Detail



ID : Ahg911775

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|911775|Al_scaffold_0001_2029
Sequence
ATGGGAGAAC AATCCCCTTC TCAACCATCG ACTCAATCCC AAAGTCGACC ACAATCACCC AAACCCGATA CGCATAACCT AATTCCGCCG GAATCCACCG ATGTATGCAT CGATTCAGCC GGAGTTTCAG GCTCAATCGT CTCATCGACC ACAATCGACG CTGGACGGAT CACTGAACTA GGCAATGTAT CGTCTCCGCC GTCCAAAATC CCTCTCCGCC CTCGGAAAAT CCGGAAACTT ACACTCGACG GAGACGTCTC CGGTGAAGAC TATAAGGTGG ATGATATCTC CTCTCAAGTA ACCTCACCGC TCGCGACTGG AAAATCTCCC GGTAAAGGTA AATTATCGCA GTCACGAGTT ATAACTGTGC CGAGGATCCA AGCTCGGCCT CTGACATGTG AAGGTGAGCT TGAAACAGCG ATTCACTATC TTCGTAATGC GGATCCTTTG CTCGCCGCGT TAATCGACGT TCATCCACCG CCGACGTTTG AGTCGTTCAA GACTCCGTTT TTAGCGCTGA TACGAAGCAT TCTTTACCAA CAGCTTGCTA CTAAAGCTGG GAATTCAATC TATACACGAT TTGTTGCTCT CTGTGGCGGC GAAAATGTGG TTGTCCCTGA GACGGTCTTA GCTTTAAATC CTCAGCAGCT TCGTCAAATC GGCGTCTCAG GACGTAAGGC GAGTTATCTT CATGATCTAG CTAGAAAGTA TCAAAATGGA ATTTTGTCGG ATTCGGCGAT TATGAACATG GATGAGAAGT CTTTGTTCAC TATGTTAACA ATGGTTAATG GAATTGGGTC ATGGTCTGTT CATATGTTCA TGATAAATTC TCTTCATAGA CCAGATGTTT TGCCGGTTAA CGATCTCGGT GTTAGGAAAG GAGTGCAGAT GCTGTATGGC TTAGATGACC TGCCTCGGCC ATCGCAGATG GAGCAGCATT GTGCCAAGTG GAGACCGTAC AGATCAGTGG GTTCGTGGTA CATGTGGCGG CTCATTGAAG GTAAGGGCAC ATCAACGAGT GCTGTTACAG CTGGAGCTGC TATGTCATTG CCGCCATTGG AAGATATTCA ACAAGAACAT CAGCAGCAAC AGCTTATGGA CCCTCTTAAT AGTGTGTTCA GTATCGGGTA CGGGTCGATC TGTGGACGGG AAGCAAAAGA GTATCCAAGA GTTCCTTCGC CGCAACCGTC GTTCCTTGTC GCCGGAACAA GTGTGGACAT ATCAATGGAT GAAGAAAGGC CTCCAAGAAG TGGTGAAGAA GAATGTACTA TATCACTGTT TGATTATTCT GTTGAGAATC ATCTAAAAGC AGTGGACTCT ATCAGTGATC TCTGTGGTGA AGCTAATGCT GAAATTGATG AGAATGATAT CAACACATTC TCATCATCAG TTACATTCTT GAGGGAATGG AGGCATTATA ATTTCGAACC AAAGATTTTT GCATTCTACA ACGAGGCTGG GAAAAGCCGT GAACCAAAGG ATGCAAACTG TCAAAATTTG CCTCAGTTTT CTTCGGCACG AGCTCCGAAG GTTAAGATAC ATGACGATGA ATCATCATCA TCATCTGGTG AAATCAGCAA GGATTTTGTG ATGCATGTTG GAGGCTCTGT TTGGGCATTG GAGTGGTGTC CCAGAGTTCA TGGAAATCCA GATGCTCAGG CTAAATGTGA GTTTCTAGCT GTGGCTACTC ATCCGCCTGA CTCATACAGT CACAAGATAG GTATTCCTCT TACAGGTCGA GGCATCATTC AGATATGGTG CATTATAAAT GCCACTTGCA AGAAAGATAG CACCCATTTT TCCGAGAAGA GTAAAAAATT GACAGGAAAG TCTCGAAAAA TACCATCTGG TGAAACTACT GAAACAACAG AACCTAAGAA GCCGAGAGGC AGGCCCAGAA AGCATCCAAT AGAGACAACA GAGACAACAG AGCCTAAGAA ACCAAGAGGT AGACCTCGAA AGAAGAGTAC TGCCGAGTTA CCTGTTGAGC TTGATGATGG TGTTCTTTAC GTTGAAGCTC TGTCTGTTAG GTATCCGGAA AATTCAGTTG TTCCCGCAAC TCCTCTTCGG ATACTACGAG AAACTCCAGT AACAGAAACT AAGGTCAACA ATGAAGGTTC AGGACAAGTG TTGTCTTCGG AAAATGCAAA TATCAAGCTT CCTGTACGGA GAAAGAGACA AAAAACCAAA GTTACTGAAG AAAGTTGCAA ACCCATGCTA TTAGAAAATA GTGAAGCTGT TGGAAATGTA CCGGGCGAAC CGTCCCCAGG TATTTCTGAA GACATAGCTC TTCCAAGGGT TGTCTTATGC CTGGCCCACA ATGGAAAAGT TGCCTGGGAT ATGAAATGGC GTCCCTCATA TGCCGATGAT TCTCTTAATA AGCACAGAAT GGGATATTTA GCTGTCTTGC TGGGGAATGG ATCTCTGGAA GTGTGGGATG TTCCAATGCC TCAAGCAACA TCAGCTCTAT ATTTATCTTC AAAGAAAGCT GCGACTGATC CCCGTTTTGT GAAACTGGCT CCCGTTTTCA GATGTTCAAA CTTGAAGTGT GGCGATACAA AGAGTATTCC TTTGACAGTT GAATGGTCGA CTTCAGGGAA CCCTGATTTC TTACTGGCTG GTTGCCACGA TGGCACGGTT GCTCTCTGGA AGTTTTCTAC AACTAAATCT TCAGAAGATA CAAGACCTTT ACTTTTCTTC AGCGCAGATA CAGCTCCTAT TAGGGCAGTT GCATGGGCTC CTGGTGAAAG TGATCAGGAA AGTACAAACA TAGTAGCTAC TGCTGGACAT GCAGGTCTAA AGTTTTGGGA CTTACGTGAT CCGTTCCGTC CTTTATGGGA TTTGCACCCA GTACCAAGGT TTATTTACAG CCTTGATTGG TTACAAGATC CAAAGTATCA ATCGCTGCTC TATCCTCAGT TGATTATACA GTCTTTAGAT CAATGGTTTG AAGTCCTGAT TAAATATGGG GTTTTAAATA TCTGTAGATG CGTTTTATTG TCCTTTGATG ATGGAACATT AAGAATCCTA AGCTTGGTGA AGGTTGCGTA TGATGTTCCT GCTACTGGAA GGCCTTACCC TAACACAAAA CAGCAAGGGT TAAGCGTTTA TAACTGTTCA ACTTTTCCCA TATGGAGTAT TCAAGTATCA AGGCTAACAG GAATAGCAGC CTATTGCACT GGGGATGGGT CGATTTTCCA TTTCGAGCTT ACGACCAAAG CAGTGGAAAA AGACACGAGA AATCGGACTC CACACTTTCT CTGTGGACAA TTGACAATGA AAGATTCCAC CTTTATAGTG CATAGTCCAG TTCCAGACAT CCCGATCGTA TTGAAGAAAC CGGTTGGTGA GACCGGTGAA AAACAGAGAT GCCTTCGAAG TCTTTTGAAT GAATCTCCTA ACCGATACGC ATCTAATGTT TCAGATGTTC AGCCTCTTGC TTTTGGACAC GAAGAGGATC CAGGTTTAGA GTCTGAATTC GAAGGAACAA ACAACAAAGC ACCAAAGTCA AAGTCTAAAA AGGGAAGGAA GAACATTGGA GAAGAGGACG AGAACCGCAG GGCATTGGTC TGTGTTAAAG AAGATGGCGG AGAAGGAAGA AGAAAAGAAG CTAGCAACAA TAGCAATGGA ATGAAAGTAG AAGGGTTCCC GCCTAAAATG GTGGCGATGC ATCGCGTGCG GTGGAACATG AATAAAGGAA GTGAGAGATG GTTATGTTAC GGTGGAGCCG CCGGGATTGT TCGGTGTCAA GAGATTGCTC CAACCTCAAA TTGGAAACCT CAGAGATGA 
Length3789
Protein Sequence
Protein Residue
Map Locationscaffold_1: 7889278.. 7896464
Download Sequence
A.thaliana
AGI-codeAT1G19485.1
DescriptionTransducin/WD40 repeat-like superfamily protein
TAIR curator summary
Alias
Gene coexpression
MR
MR Locus Description
17.2337 Ahg330119 zinc ion binding
18.3303 Ahg947666
21.4476 Ahg487372 arginine-tRNA protein transferase 1
21.6333 Ahg471787 golgi snare 11
25.4951 Ahg343220 SNF7 family protein
26.3629 Ahg919857
26.9444 Ahg489806 Cofactor-independent phosphoglycerate mutase
28.4956 Ahg948606 chromatin remodeling 4
32.218 Ahg478246 DHHC-type zinc finger family protein
34.5977 Ahg944727 Regulator of Vps4 activity in the MVB pathway protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression