Detail



ID : Ahg914753

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|914753|Al_scaffold_0001_5007
Sequence
ATGCCGAGAT TAATTCTCTC CTTCGTACTT TGGTTTGTGC TCATGTCTGG TTTATTTCAT GTGGTTAGAC CACAGAACCG AACCAGAGCC ACTACTGATC CTGACGAAGC TCGGGCGTTG AACAACATCT TCAGGGCGTG GAAGATAACG GCGACGAAAG CATGGAACAT AAGCGGCGAA CTATGCAGCG GAGCCGCCAT AGACGACAGT GTCAGCATCG ACAATTTAGC TTTCAATCCT CTCATCAAAT GCGACTGCTC TTTTGTCGAT TCCACTATCT GCCGCATCGT TGCTCTGAGA GCTCGTGGTA TGGATGTTGC TGGACCAATT CCTGAAGACC TCTGGACTCT TGTTTACATC TCAAATCTGA ACCTAAATCA GAATTTCTTG ACTGGTCCTC TGTCTCCTGG CATTGGAAAT CTGAATCGAA TGCAGTGGAT GACTTTTGGG GCTAATGCAT TGTCTGGACC AGTTCCCAAA GAAATTGGTC TGCTTACTGA TTTAAGATCA TTAGCGATTG ATATGAATAA TTTCTCCGGT TCTCTACCAC CTGAGATTGG AAATTGCACG AGGCTAGTGA AAATGTACAT TGGAAGTTCA GGACTTAGTG GTGAAATTCC TTCATCATTT GCTAATTTTG TGAACTTGGA AGAAGCCTGG ATTAATGATA TCCAACTTAC AGGTCAGATA CCAGACTTCA TAGGAAATTG GACCAAACTT ACTACTCTGA GAATTCTGGG GACTAATTTG AGTGGTCCAA TTCCATCTAC ATTTGTGAAC TTAATTTCAT TGACAGAATT GAGACTAGGT GAAATAAGTA ATATCAATTC TTCTCTTCAA TTCATCCGAG AAATGAAATC TATAAGTGTC CTAGTATTAA GGAACAATAA TCTCACAGGC ACAATACCTT CCAATATTGG AGATTACTTG TGGCTACGAC AACTTGATTT GAGTTTCAAC AAGCTAACTG GGCAAATTCC AGCTCCGCTT TTCAACTCAA GACAGCTTAC TCACTTGTTT CTTGGAAATA ACAAGCTGAA TGGTTCCTTA CCCACTCAAA AAAGTCCCTC TCTTAGCAAT ATAGATGTGT CATACAATGA TTTAGCAGGG GATCTTCCTT CTTGGGTTCG CCTACCAAAC TTGCAACTTA ACCTGATTGC CAACCACTTT ACCGTGGGAG GTTCTAACAG AAGGGCTTTC CGCGGACTGG ATTGCCTCCA GAAGAATTTC CGCTGCAATC GAGGGAAAGG AGTATATTTC AACTTTTTCA TCAATTGTGG AGGCCCGGAT ATCAGGTCTA GTAGTGGAGC TTTGTATGAA AAGGACGAGG GCGCACTTGG ACCAGCTACA TTTTTCGTAA GTAAAATGCA GAGATGGGCA GTCAGCAATG TAGGACTATT TACTGGGAGT AACAGCAATC AATACATATT TGTTTCGCCT ACACGATTTG CAAACACTTC AGACTCAGAG CTTTTCCAAT CAGCGAGACT CTCTGCATCT TCTTTAAGGT ATTACGGACT GGGGCTAGAA AATGGAGGCT ATAGTGTAAC AGTTCAGTTT GCTGAGATAC AAATACAAGG TTCTAATACC TGGAAAAGTC TTGGAAGGCG AGTTTTCGAC ATATATGTCC AGGGAAAACT TGTTGAAAAG GATTTTGACA TGCACAGAAC TGCTAACGGT TCTAGTATCC CCGTAATTCA AAGAGTCTAT AAAGCAAATG TATCTGAAAA TTACCTTGAG ATTCATCTTT TCTGGGCTGG AAAAGGGACC TGCTGTATTC CTGCTCAAGG CACTTATGGG CCGTTAGTCT CAGCGATCAG TGCAACTCCA GATTTCATAC CTACTGTAAA AAATAAGTTG CCCTCGAAAT CCAAGAAAAA AATTGGTATC ATCGTAGGGG CCATTGTAGG GGCAGGAATG TTAAGTATCT TGGTGATTGC TATCATCTTA TTCATCCGTA GGAAAAGGAA AAGGGCGGCT GATGAAGAAG TGCTAAACAG TCTGCACATA AGGCCCTACA CCTTTAGTTA CTCAGAACTC AGAACTGCAA CTCAAGATTT TGATCCTTCC AACAAGCTTG GGGAGGGAGG ATTTGGACCT GTTTTTAAGG GAAAACTGAA CGACGGAAGA GAGATAGCTG TGAAGCAATT GTCAGTTGCA TCCAGGCAAG GAAAGGGTCA ATTTGTTGCG GAGATTGCCA CTATATCAGC TGTTCAGCAT CGCAACCTTG TAAAATTGTA TGGATGCTGC ATTGAGGGAA ATCAGCGCAT GCTTGTATAT GAATACCTCT CAAACAACAG TCTAGATCAA GCTCTATTCG AGGAAAAGAG TTTGCAGCTT GGCTGGTCAG ACCGTTTCGA GATATGCTTG GGAGTAGCAA AAGGTTTAGC ATATATGCAT GAGGAGTCAA ATCCCCGTAT AGTGCATAGG GATGTGAAGG CAAGCAATAT TCTGCTGGAC TCGGATCTGG TCCCAAAACT CTCTGATTTT GGGTTGGCCA AACTATATGA TGATAAGAAG ACGCACATAA GTACCCGAGT TGCAGGGACG ATCGGATATC TGTCACCAGA GTACGTGATG TTTGGACATC TTACGGAGAA GACGGATGTG TTTGCCTTTG GTATAGTGGC TCTGGAAGTT GTCAGCGGAA GGCCTAACTC CTCTCCAGAA TTGGATGATG ACAAACAATA CCTTCTCGAA TGGGCATGGA GCCTACACCA AGAGAAGCGT GATTTGGAAG TAGTGGATCC GGATCTAACA GAATTTGACA AGGAAGAAGT GAAACGTGTA ATAGGAGTAG CTTTCTTGTG CACACAAACA GATCATGCAA TACGGCCAAC TATGTCCCGT GTGGTAGGTA TGCTGACCGG CGATGTGGAG GTAACCGAAG CCAATGCGAA GCCAGGCTAC GTCTCTGAGA GAACATTTGA GAATGCAATG AGCTTCATGA GTGGTTCAAC GAGCTCGAGC TGGATATTGC CTGAAACTCC AAAGGATTCT TCCAAGTCCC AAGTTGAAGA ACGTGGACGA CGACATATGC TCAAGCTACG GCGGTATCTG TGTCTACTCC TCACCGTCTG GTTCTTGTGT AATTCCGGTT CGGTTTACGT GGTTCGAGCC CAAAATCGAA CCGTAGCCAC CACACATCCC GACGAAGCGC GAGCTTTGAA CTCAATTTTC GCGGCTTGGA GGATTCGGGC GCCGAGGGAA TGGAACATCA GCGGCGAACT TTGCTCCGGC GCCGCCATCG ACGCAAGTGT CCAAGACTCA AACCCTGCCT ACAATCCTCT AATCAAATGC GATTGTAGTT TCGAAAACTC CACAATCTGC CGCATTACCA ACATCAAGGT TTATGCGATG GAAGTTGTAG GACCTATACC TCAACAGCTC TGGACTTTGG AATACCTCAC AAATCTGAAC TTGGGTCAAA ATGTTCTCAC TGGCTCACTA CCGCCTGCAA TTGGAAATTT GACTCGAATG CAATGGATGA CTTTTGGGAT CAATGCGTTG TCTGGCCCTG TTCCTAAAGA AATCGGTTTG CTTACAAATT TAAAATTACT TAGTATTAGT TCAAATAACT TTTCCGGTTC TATACCAGAT GAGATTGGGA GATGTACAAA ACTACAACAG ATATACATTG ATAGTTCGGG TCTCAGCGGG AGAATACCTG TATCATTTGC TAATCTTGTG GAGCTGGAAC AAGCTTGGAT TGCGGATATG GAACTTACAG GTCAGATACC AGACTTTATA GGAGATTGGA CCAATCTTAC TACCTTGAGA ATTCTCGGAA CTGGTTTAAG TGGTCCAATA CCGGCGTCGT TTTCCAACTT AACTTCTTTG ACAGAGCTGT TTCTAGGAAA CAACACGTTG AATGGTTCCC TTCCCACTCA AGAGAGGCAG TCTTTGAGCA ATATAGATGT GTCGTACAAT GATTTGTCTG GAAGTCTTCC TTCATGGGTC AGCTTACCAA ACTTGAATCT CAACCTAGTT GCTAACAACT TCACATTGGA AGGTCTTGAC AACAGGGTTT TATCAGGACT GAACTGCCTG CAGAAGAACT TCCCCTGCAA TCGGGGCAAA GGAATATATT CTGACTTCTC AATCAACTGC GGAGGCCCAG AGATAAGATC TGTAACTGGA GCACTATTTG AGAGGGAGGA CGAGGATCTT GGACCAGCTT CATTTGTCGT GAGTGCTGGT CAGAGATGGG GAGCCAGTAG TGTAGGACTT TTTGCCGGAA GTAGCAATAA TATATACATA GCTACCTCAC AATCACAATT TGTCAACACT TTGGACTCAG AGCTGTTTCA GTCAGCAAGA CTTTCTGCAT CTTCCCTTAG GTATTATGGG TTGGGGCTAG AAAATGGAGG TTATACCGTA ACACTTCAGT TTGCTGAAAT ACAAATTCTA GGTTCTACTT CTAACACTTG GAGAGGTTTA GGAAGACGAC GTTTTGACAT TTATGTCCAG GGAAGACTTG TTGAAAAAGA CTTTGATGTA CGCAGAACAG CTGGTGACTC CACTGTTCGA GCAGTTCAGA GAGAATATAA AGCAAATGTA TCAGAAAATC ATCTCGAAGT CCATCTTTTC TGGGCTGGAA AAGGAACATG CTGTATTCCT ATCCAAGGGG CTTATGGGCC ATTAATATCA GCCGTCGGTG CAACACCAGA TTTCACACCA ACTGTGGGTA ATAGGCCTCC ATCAAAGGAA AAGAACATGA CAGGTACTAT TGTGGGTGTC ATTGTTGGCG TTGGACTATT GAGCATCTTT GCTGGTGTGG TTATTTTTAT CATCCGAAAA AGAAGAAAGC GGTACACAGA TGATGAAGAA ATACTTAGTA TGGACGTAAA GCCTTACACC TTCACTTACT CAGAACTAAA AAGTGCAACT CAAGATTTCG ATCCCTCAAA CAAGCTTGGA GAGGGGGGAT TTGGGCCTGT TTATAAGGGA AAACTCAATG ATGGAAGAGA GATAGCAGTG AAGCTATTGT CGGTGGGATC CCGGCAAGGG AAGGGACAAT TTGTTGCAGA AATTGTAGCA ATTTCTGCAG TTCAACATCG CAACTTGGTA AAACTTTATG GGTGCTGCTA TGAAGGAGAT CATCGTTTGC TTGTATATGA ATACCTTCCT AACGGAAGTC TTGATCAGGC TCTATTTGGT ACGCACAGAA ACATGATTAT CGATCTATGC TTCTGCCAGC CTAAAAGCAC TCATTATGTA CTTGTCGTTG GTTTGAATGT TGCAGGGGAA AAGACTTTGC ATCTTGATTG GTCAACCCGT TATGAGATAT GCCTGGGAGT AGCCAGAGGT CTAGTCTATC TCCATGAGGA GGCGAGGCTT CGCATAGTAC ACAGGGATGT GAAGGCCAGC AACATTTTGC TTGACTCTAA ATTGGTACCA AAAGTTTCTG ATTTTGGGCT TGCAAAACTG TACGATGACA AGAAAACCCA CATAAGTACC CGAGTGGCAG GGACTATTGG GTATCTTGCA CCAGAGTATG CCATGCGTGG ACATCTAACA GAGAAAACAG ATGTGTATGC CTTTGGTGTT GTGGCTCTTG AGCTAGTGAG TGGAAGGCCA AACTCTGATG AGAACTTGGA GGATGAAAAA AGATATCTTC TTGAATGGGC ATGGAATCTA CACGAGAAAA GCCGTGAAGT TGAACTTATT GATCATGAGC TGACTGATTT CAACACGGAA GAAGCAAAGC GCATGATTGG CATTGCTCTG TTGTGCACAC AGACATCTCA TGCCTTGAGA CCACCAATGT CACGAGTGGT GGCCATGCTT TCAGGAGATG TTGAGGTCAG TGATGTCACT TCAAAGCCAG GCTACCTAAC CGACTGGAGA TTTGATGACA CCACAGGGTC CTCTATCAGC GGCTTTCAAA TTAAAAACAC GGAGGCTTCT GAATCCTTCA TGAGCTTTGT GGCGCCTGGC TCCGAGATAT CACCAAGAAA CAACGACTCT AAACCAATGC TTGGAGCCCA GATGAATGAG GGAAGATGA 
Length6009
Protein Sequence
Protein Residue
Map Locationscaffold_1: 28241211.. 28253716
Download Sequence
A.thaliana
AGI-codeAT1G56145.2
DescriptionLeucine-rich repeat transmembrane protein kinase
TAIR curator summary
Alias
Gene coexpression
MR
MR Locus Description
3 Ahg482101 Integrin-linked protein kinase family
9.43398 Ahg475187 S-locus lectin protein kinase family protein
11.3137 Ahg324764 Cyclophilin-like peptidyl-prolyl cis-trans isomerase family protein
12.8062 Ahg471476 autoinhibited Ca2+/ATPase II
13.5277 Ahg491676
13.8564 Ahg480938 diacylglycerol kinase 5
16.7929 Ahg934176
17.9722 Ahg943517 xanthine dehydrogenase 1
20.347 Ahg487352 transducin family protein / WD-40 repeat family protein
21 Ahg490530
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression