| Annotation |
|---|
| Description | jgi|Araly1|914880|Al_scaffold_0001_5134 |
| Sequence |
ATGGCTAAGT TTTCTTCCAT CATCACCCTT ATCTTCGCTG CTCTTGTTCT CTTTGCTGAT TTAGAAGCAC CGGTAATTGT GAAAGCAGAG CTTTGCAAAA GGGAAAGTGA GACATGGTCA GGACGTTGTG TAAACGATTA TCAGTGCAGG GATCATTGCA TTAACAATGA TAGAGGAAAT GATGGATATT GCGCTGGTGG CTACCCATGG TACAGAGGAT GTTTCTGTTT CTTCTCTTGC TAA |
| Length | 243 |
| Protein Sequence | |
| Protein Residue | |
| Map Location | scaffold_1: 29876299.. 29876615 |
| Download Sequence |
|
| A.thaliana |
|---|
| AGI-code | AT1G55010.1 |
| Description | plant defensin 1.5 |
| TAIR curator summary | Predicted to encode a PR (pathogenesis-related) protein. Belongs to the plant defensin (PDF) family with the following members: At1g75830/PDF1.1, At5g44420/PDF1.2a, At2g26020/PDF1.2b, At5g44430/PDF1.2c, At2g26010/PDF1.3, At1g19610/PDF1.4, At1g55010/PDF1.5, At2g02120/PDF2.1, At2g02100/PDF2.2, At2g02130/PDF2.3, At1g61070/PDF2.4, At5g63660/PDF2.5, At2g02140/PDF2.6, At5g38330/PDF3.1 and At4g30070/PDF3.2. |
| Alias | [PDF1.5][plant defensin 1.5] |
| Gene coexpression |
|---|
| MR |
| MR | Locus | Description |
| 8.94427 |
Ahg914464 | transposable element gene |
| 8.94427 |
Ahg898994 | transposable element gene |
| 8.94427 |
Ahg897431 | transposable element gene |
| 8.94427 |
Ahg901561 | transposable element gene |
| 13.7477 |
Ahg942615 | transposable element gene |
| 18.5472 |
Ahg916799 | basic helix-loop-helix (bHLH) DNA-binding superfamily protein |
| 21 |
Virus2799 | |
| 25.4165 |
Ahg930698 | Paired amphipathic helix (PAH2) superfamily protein |
| 26.4386 |
Ahg923933 | ROTUNDIFOLIA like 9 |
| 27.9285 |
Virus1475 | |
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| RNA-seq |
|---|
Seasonal expression (July 2011 to June 2013) |
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| The four seasons |
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| Growth Chamber expression |
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