| Annotation |
|---|
| Description | jgi|Araly1|915594|Al_scaffold_0008_345 |
| Sequence |
ATGCCAAGAG AGCATCAGAA GGAACTCAAC AAACCTCTGG CTTTTAGCTT CTGTGCGCCC TCACACGCGG ACCAAAATTT TACACCTTGT CTGCAACCAG GATCTTCTGT AATGACACAA CTAAATCCTT CTTGGAGAAA CACGCTTGTG GGTTTTGCTA TGCTGGTGGA AGTTTCATTT TCAGAGGCTT GCTGTGATGT TACTGGTTTA GGCATACGTT GTGTTTGCAG ATGGAAGAAC ATGGCAGGCC GCTCTCAGAG TATAGAAAGA AATTTGCATT GTTGGGCTAC AGGGGAAGCT GTTCCAAAAT TTCAAAAGGA TCATATGTTT GTCTTCTTTG ATGTCAAAAT GCGTCCAAGT ACCGATGACG GAAATGAGCC AGATGTATTC GCTGATTTAG TTGTGTTTGA ATTCTTTCCT GTCGACAGAC AGAAGAAGCG GCGTCTAGAT GATAGTTGCA TAGTGAAAAG ATGTGGAGTC TCTGCAATTG ATGCTGCAAC TGGCGAAACA AGTCTTAAGA TGAGTTCATC AGATTCTTTT TTGCATAATA AAAAAGTTGA AGAAATTTCA AGAAACAGCT ATGATGGTTT ACAGGAGATG GATAAAGTTC TATTTCTTTA CATGGCATGT TTGTTCAATG ACGAGGATAT TGATTTGGTG GCACCACTTA TTGCCAACAT TGACATGGAT GTTAGCTTTG GGATCAAGGT CTTAGCCGGT AGGTCTCTCA TACGTGTATC ATCTAATGGG GAAATAGTGA TGGATTCTTT GCCACGACGA ATGGGTAAAG AAATCCTGCA TACAGAATCC ATGCTGCCTG GTAGCTCAAA AGACTTTGGA AAGATTTCCT CTATGGGTCT TTCTTCGCCT CACAATCAGA AATGTAATGT TTTCCTGAGC TTCAGCACAC AAGATATTCA GATAAACTTC CTCGACTACT TGATTGCAGC TCTTAGAAAA AACGTAATCC CTTCATCCAA AAGATATGGG ATAAAAATAA CACAAGAGGT ACCGGAGTCT CTATCGACGA TCTCAATCAT CTTGTTTACG ATCAATTATG CCTCTTCAAG TTGGCTCCTG AACGAATTGG TGGAGATTGC TAAGAGCAAT GAAGACGTGA GTCATATGCT GATACCAATT TTCCACCCCG ATTTGGATCC CTTGGATGTT AGGGAACAGA CGGGAGAATT TGGAAGGCGA TTCGAAGAAA CTTGCAAGAA CAAAACAGAG GATGAGAAAC AACAATGGCG CCGAGCTTTA ACCGACATAT CATCCATAGT AGGATACAAT ATTACAAACT GTGATAGCTC TGATGAAGAA TTCATAAAAT CGATGGTCAA AGAGGTTAAA GATTTAATGG CGAGGATCCG AATTAAGGGA AAACCATCAA GAGAAGTAAT TAGTCAAGGA GTTGTGTTTG TTGTCCCTGC AAGGAGCCTC GACATCACTC ATTCCGAGAA TCCTAAATTA TGGACATGGA GTTATGTACA AAGTGAAGCA GACATCGAAA TCGCAATGCT GAATAAAATA TACTGGCTCC AAATAAAGGG ATATTTTGTC ACGAGGAAAC TAACTCCAGG AACAAAGTAC AAGGTGGTGT TTATGATATA CTTAGATGAT ACAGCATCCG GGTGGGAGGA GCCAGTGACC CTAAATTTGA AGCTGAAACA TCGCGATGGA AGCCAGAGTA TACAAGAGTC GACTTTGTGT TTAAATGACT ACATATACGA CAATTGGGTG GATATTCAAG CTGGAGAGTT TGAGGCACTG CCAGAGAACG TGGTGGAGAT CTTCTTCTCT TTGCATCAAT ATGAGTACTC TAACCGGAAG AGTGGGCTCT TGGTCAAAGG TGTCGCAATT CGTCCAACGG ACCAAGTCAT TATATGA |
| Length | 1887 |
| Protein Sequence | |
| Protein Residue | |
| Map Location | scaffold_8: 2088513.. 2090729 |
| Download Sequence |
|
| A.thaliana |
|---|
| AGI-code | AT5G45260.1 |
| Description | Disease resistance protein (TIR-NBS-LRR class) |
| TAIR curator summary | Confers resistance to Ralstonia solanacearum. Similar to NBLS-TIR resistance genes,and also contains similarity to transcription factors. Interacts with pathogen effector protein AvrPop2. |
| Alias | [ATWRKY52][RRS1][SLH1][ARABIDOPSIS THALIANA WRKY DOMAIN PROTEIN 52][RESISTANT TO RALSTONIA SOLANACEARUM 1][SENSITIVE TO LOW HUMIDITY 1] |
| Gene coexpression |
|---|
| MR |
| MR | Locus | Description |
| 1.41421 |
Ahg948494 | Disease resistance protein (TIR-NBS-LRR class) |
| 1.41421 |
Ahg948495 | Disease resistance protein (TIR-NBS-LRR class) family |
| 5.19615 |
Ahg473540 | Protein of unknown function (DUF567) |
| 7.4162 |
Ahg924151 | Leucine-rich repeat transmembrane protein kinase |
| 11.8322 |
Ahg480944 | Arabidopsis phospholipase-like protein (PEARLI 4) family |
| 13.6015 |
Ahg330877 | phloem protein 2-B8 |
| 16.3707 |
Ahg943817 | Arabidopsis phospholipase-like protein (PEARLI 4) family |
| 21.166 |
Ahg478899 | Leucine-rich repeat transmembrane protein kinase |
| 27.6586 |
Ahg486874 | Leucine-rich repeat protein kinase family protein |
| 34.5832 |
Ahg943226 | cysteine-rich RLK (RECEPTOR-like protein kinase) 40 |
|
| RNA-seq |
|---|
Seasonal expression (July 2011 to June 2013) |
|
|
| The four seasons |
|
|
| Growth Chamber expression |
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