Detail



ID : Ahg916931

Blast(Query) A.halleri   /   A.thaliana (NOT RECIPROCAL)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|916931|Al_scaffold_0008_1682
Sequence
ATGGCTTCGA AGCTCCCGTT GCAAAACATC GACAACGCCA ATGTTGCGAA GGCTCCGGCA TCATCGCTAG CTTCCGCTGG GAATACAATT GAGCATATCC TACTTTGTCC TGATTCTTAT ATAGGATCGA TTGAGAAACA TACCCAAACG CTTTGGGTTT ATGAGAAGGA AGAGATGGTT TGTCGTTCTG TTACTTATGT TCCTGGATTG TATAAGATCT TTGATGAGAT CCTTGTGAAT GCTGCTGATA ATAAACGGAG AGATCCGTCT ATGGATTCTG TCAAAGTTGT GATCGATGTT GAGAAGAATC AGATTAGTGT GTGTAACAGT GGTGATGGAG TTCCTCTTGA AGAAGGTGTT TATGTGCCTG GGATTTTTTT TGGTCCTTGG TTGAGTAGGA ATTACAATCA TCCTATATCC AGAGCAAATC ATTTGAGACA GAAAATCGGT ATGCCTGGCA CTCATATTTT TCCATCGATG GTTGATGACC TCACGCTTGA ATACTATGAG AAGAAAAAGG AAACTATGCT GAAGAATCTG GAACTTGAGC TGCTGAAACT AGAGAAAGCT GATGATCAGA AGTTGAGAGA AAAATGGTTC ACAGAAATCC TGGAAAATGC CAAGCCTGTC GAAGCAGCAG TTGCTGGAGC AACTAATGCA GCTGAAAAAA GCTCATACTA TAATTACCTA TTGCAATTGT CTGTTTTGAT TACAGATACA GTACAAGAAG TAAGGGCACA GAGAGATCAA ATGATGGATG CAGTTGAAGA CTTGAAAAAC GCCACACCGG AATCCCTCTG CCTCAAAGAA CTAGAGGAAC TTGATAAGCA AGATGCTCAA CCCGATGAAG AGAGACAGGC GCCAAAGAAA CCGGCACCAA AGAAAGCCAG TGAATCTGTA ACAAAAGAGG CTTCAAATTC AGCAATGGAC ACAGAAACAA CTGAAACAGC GAAAGAAATT TCTCTGGATG ACGATGATGA CGACGTGGTA GTGTCCCCGG AGAAGAAAGT GAGGAAGCTG AGATCGTCTC CGTTTAACAA GAAGAGTAGT TCAGTGATGA GCAGGTTGGC TAATAAGGAA GAGGAGAGCA GCGAGAATGC AGCTGGAAAC TCATCGTCAG AGAAATCTGG AGATGTTTTT GCGAATAGGG GGTATGTGTG GTGGAGTGAT TCGGAGAGTG AATCTGGGAA TGAGTCTGAG TTTGATGACA TTGAAGACGA TGAAGATGAT GAGTAG 
Length1236
Protein Sequence
Protein Residue
Map Locationscaffold_8: 14497959.. 14500952
Download Sequence
A.thaliana
AGI-codeAT3G23890.1
Descriptiontopoisomerase II
TAIR curator summaryEncodes a topoisomerase II that is highly expressed in young seedlings. The protein is localized in the nucleus and gene expression levels are increased in proliferative tissues.
Alias[ATTOPII][TOPII][topoisomerase II]
Gene coexpression
MR
MR Locus Description
37.9737 Ahg950185 ATPase, V0 complex, subunit E
55.4437 Ahg941471 Glycoprotein membrane precursor GPI-anchored
87.55 Ahg926358 cullin 3
93.2094 Ahg490872 arabinogalactan protein 18
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression