Detail



ID : Ahg917392

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|917392|Al_scaffold_0008_2143
Sequence
ATGATGCATT TGATTTTGAG CTGCAGCTAT TTGATATCAA TGGATGGATA TTACAATGAA GCTTCTGAAG AACCTTCTTC TTCTTCTTCT TCCGGAAGTT TAGCTAGAAG CTTATTCCAT GAGTATCGCC AATCCGTTAT CCCACTCCAA AATGGGCATG TACCAAGCAT GGCGTTCATG AACAATCTTC CATACGTAGA GATTCGACCA CAAGAGATTC AAAGACTTGC TTTTAACGAC GCACAACGTC TATTCTATCA GATGAAAATA GAAGCAAGTC TTCGAGAATG GTTCCCTGAA GATTTCAATA GAAAGTCTTC TCCGGTAAAC TCCGACTATC TCCGGCCACC GCATCATCCA TCTTCATCTT CTTCTTCTCT TAGTCCCAAC AACGTCTCTG AATATTCCTC TCTTTTATTC CCACTCATCC CTAAACCTTC AACGACGACT GAAGCCGTTA ACGTTCCGGC ACTTCCACCC TTAGCTCCGG TCAATATGAT CCATCAACAA CAACAAGAGC CTTTGTTCCG TAACCGTGAA CGTGAGGAAG AAGCAATGAC AAAAGCTATC TTAGCGGTTT TAACGGGGCC ATCAAGTCCT CCGTCTACTT CTTCCTCGCC ACAGCGTAAA AGAAGAGCCA CCGCTTTTAA TAGATATTAC TCCATGATTA GTGGCCACGG TAGAGCGCCG CTGCCGAGTT TACGGAAGCA AAGCATGATG AAAAGAGCGA TTTCCTTCTA CAATAGGCTT AACATTTACC AGAGAGAGCG TTTTACTAGG GAAAACGCTA CTACACACGG CGAAGGAAGT GGTGGAAGCA GCGGGGGTGG ACGTTTTACC AGCGGGCCAA GCGCAACGCA ATTGCATCAT ATGATATCGG AGAGGAAACG GCGAGAGAAG CTTAACGAGA GCTTTCAAGC ATTGAGATCT CTCCTTCCTC CGGGAACTAA GAAAGATAAA GCATCGGTCC TCTCCATTGC AAGAGAGCAA CTATCTTCTT TGCAAGGCGA GATTTCGAAA CTACTAGAAA GAAACCGGAA GCTGGAGGCG AAGCTAGCCG GAGAAAGAGA TATTAAAAAT GATTTACTAC CCAATGAGAG GTTTAACGTT CATATAAGTC ATATATCCGA ATCAACATCA AGAGAGAGGA TTTTGGATCT AAGAGTTGTT CTAAGAGGAG ACAGCATTAG GGTTGATGAT TTGATGATAA GACTTCTTGA ATTCTTGAAG CAAATCAACA ATGTGAGCTT AGTATCAATC GAAGCTCGAA CTCGAGCTAG GGATACTTCG GTTGTTCTTG TGAGCTTAAG GCTCAAGATT GAGGGTGAAT GCGACGAATC AGCCTTCCAA GAAGCAGTCA GAAGGGTTGT TGCTGACTTG GCTCACTGA 
Length1389
Protein Sequence
Protein Residue
Map Locationscaffold_8: 16741784.. 16743895
Download Sequence
A.thaliana
AGI-codeAT5G56960.1
Descriptionbasic helix-loop-helix (bHLH) DNA-binding family protein
TAIR curator summary
Alias
Gene coexpression
MR
MR Locus Description
15.5885 Ahg486969 O-fucosyltransferase family protein
21.4942 Ahg901031
23.0868 Ahg332020 cytochrome P450, family 81, subfamily F, polypeptide 2
25.923 Ahg477006 VQ motif-containing protein
39.2556 Ahg482736 C2H2 and C2HC zinc fingers superfamily protein
48.1248 Ahg494895 Glutamate receptor family protein
49.1427 Ahg485937 exocyst subunit exo70 family protein H1
51.0882 Ahg489094 NAC domain containing protein 90
52.5452 Ahg321374 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein
57.5413 Ahg481516 phospholipase A 2A
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression