Detail



ID : Ahg918173

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|918173|Al_scaffold_0008_2924
Sequence
ATGTCCATCA ATCTGTCTCG TCTTTCGCTT CTCTCGTCCC CACGTATCTC GATTTCAACT CACGCTCCTC ACAAAGGATA CGTTTGTTGC TCGATGAAGT CTTACCGATT ATCTGAACTT ACTTCTTCCC AAGTTGATAG TTTGAAGTCA CGCCCTCGCA TTGACTTCTC TTCTATTTTC GCCACTGTGA ACCCGATTAT CGACGCTGTT CGTAGCAATG GGGATACTGC TATCAAAGAA TACACTGAAA GATTCGACAA AGTCCAACTG AACAAAGTTG TGGAAGATAT GTCTGAGCTT TCTGTTCCTG AGCTCGATTC CAATGTGAAA GAAGCGTTTG ATGTTGCGTA TGACAACATA TATGCATTTC ACTTGGCCCA AAAGTCAACT GAGAAAAGCG TTGAGAATAT GAAAGGTGTC AGATGTAAAA GGGTGTCTAG ATCTATTGGC TCTGTAGGTC TTTATGTGCC TGGTGGAACA GCTGTTTTGC CATCAACTGC TTTGATGCTT GCAATTCCTG CTCAAATTGC TGGATGTAAA ACAGTTGTTC TTGCAACTCC ACCAAGTAAG GATGGAAGCA TATGTAAGGA GGTTCTGTAT TGTGCCAAGA GAGCTGGTGT AACTCACATA CTCAAAGCTG GTGGAGCGCA GGCTATAGCT GCCATGGCCT GGGGGACAGA TTCTTGTCCA AAGGTTGAGA AGATTTTTGG TCCTGGGAAC CAGTATGTTA CAGCTGCTAA GATGATTCTT CAAAACAGCG AGGCAATGGT CTCAATTGAT ATGCCTGCTG GTCCTTCAGA AGTCCTAGTT ATTGCTGATG AACATGCTAG TCCAGTTTAC ATTGCAGCAG ACTTACTTTC TCAGGCTGAG CATGGTCCAG ATAGTCAAGT TGTTCTTGTT GTTGTAGGCG ATGGTGTAGA TCTCAACGCC ATCGAAGAAG AAATTGCCAA GCAGTGCAAA AGCCTTCCTA GAGGAGAGTT TGCTTCAAAA GCACTAAGTC ACAGTTTCAC AGTGTTTGCT CGAGATATGA TTGAGGCAAT ATCTTTCTCA AATCTGTATG CACCAGAACA TTTGATCATC AATGTCAAAG ACGCTGAGAA ATGGGAAGGA CTGATTGAGA ACGCGGGCTC GGTTTTCATA GGGCCATGGA CTCCAGAGAG TGTCGGGGAT TATGCGAGCG GGACAAACCA CGTTCTTCCA ACATATGGAT ATGCAAGAAT GTACAGTGGC GTCTCTCTCG ACTCTTTCCT GAAGTTCATG ACTGTACAAT CTTTGACAGA GGAAGGTCTG AGAAACCTTG GTCCTTATGT GGCGACAATG GCTGAAATCG AAGGTTTAGA TGCACACAAG AGAGCTGTCA CTCTCAGACT CAAGGATATC GAAGCTAAAC AGCTTGCCCA AACAAATTGA 
Length1410
Protein Sequence
Protein Residue
Map Locationscaffold_8: 19924725.. 19927195
Download Sequence
A.thaliana
AGI-codeAT5G63890.2
Descriptionhistidinol dehydrogenase
TAIR curator summaryEncodes histidinol dehydrogenase. Up-regulated in response to UV-B.
Alias[ATHDH][HDH][HISN8][histidinol dehydrogenase][HISTIDINE BIOSYNTHESIS 8]
Gene coexpression
MR
MR Locus Description
22.4277 Ahg487529 Ribosomal protein S4 (RPS4A) family protein
29.0861 Ahg488362 Ribosomal protein S4
39.6863 Ahg926602 40s ribosomal protein SA
47.5815 Ahg493389 Ribosomal L27e protein family
51.643 Ahg487981 Mog1/PsbP/DUF1795-like photosystem II reaction center PsbP family protein
58.6941 Ahg477755 Ribosomal protein S3Ae
60.4483 Ahg939120 Ribosomal protein S13/S15
61.441 Ahg472693 glycine-rich protein
61.498 Ahg945188 Nucleic acid-binding, OB-fold-like protein
62.2896 Ahg919727 Translation protein SH3-like family protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression