Detail



ID : Ahg918732

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|918732|scaffold_100013.1
Sequence
GCTCTTCCTC CCACAGATCG AAACCATGAA TCCTGAGTAC GACTATCTTT TCAAGCTCCT GCTTATCGGG GATTCTGGCG TAGGCAAGTC TTGTCTTCTT TTGAGATTTT CTGATGATTC TTATGTAGAA AGTTACATTA GCACTATTGG AGTCGATTTT AAAATTAGGA CTGTGGAGCA AGATGGGAAA ACGATTAAGC TCCAAATTTG GGACACTGCT GGTCAAGAAC GGTTCAGGAC TATTACTAGC AGTTACTACC GTGGGGCACA TGGAATTATT ATTGTCTACG ATGTCACAGA TCAAGAAAGC TTCAATAATG TGAAGCAATG GTTGAGTGAA ATTGATCGTT ATGCTAGTGA CAACGTGAAC AAACTCCTGG TTGGAAACAA GTCTGATCTT ACTCAAAACA GAGCCGTTCC TTATGAAACG GCCAAGGCTT TTGCCGATGA AATTGGGATT CCTTTTATGG AGACTAGTGC AAAAGATGCT ACAAACGTAG AACAGGCTTT CATGGCAATG TCTGCATCCA TCAAAGAGAG AATGGCAAGC CAACCAGCTG GGAATAATGC AAGACCGCCG ACAGTGCAGA TCAGAGGACA GCCTATGGCA CAGAAGAACG GCTGCTGCTC AACTTGATTG AATTGACCAG CCTAGCA 
Length657
Protein Sequence
Protein Residue
Map Locationscaffold_1: 20480.. 22139
Download Sequence
A.thaliana
AGI-codeAT1G02130.1
DescriptionRAS 5
TAIR curator summaryBelongs to the Rab1 GTPase subfamily. This small GTP-binding protein is required in ER to Golgi transportation.
Alias[ARA-5][ARA5][ATRAB1B][ATRABD2A][RA-5][RABD2A][RAS 5][ARABIDOPSIS RAS 5][ARABIDOPSIS THALIANA RESPONSIVE TO ABSCISIC ACID 1B][ARABIDOPSIS THALIANA RAB D2A][RAB D2A]
Gene coexpression
MR
MR Locus Description
4.47214 Ahg484013 Lung seven transmembrane receptor family protein
5.47723 Ahg951176 SPT4 homolog 2
7.87401 Ahg489171 Tudor/PWWP/MBT domain-containing protein
14.8997 Ahg944394 Basic-leucine zipper (bZIP) transcription factor family protein
17.2916 Ahg932816 Transducin/WD40 repeat-like superfamily protein
20 Ahg484790 Phosphoinositide phosphatase family protein
21.5407 Ahg478912
24.7992 Ahg312180 eukaryotic translation initiation factor-related
26.5518 Ahg926872 aldehyde dehydrogenase 10A8
27.4955 Ahg489367 TBP-associated factor 5
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression