Detail



ID : Ahg919422

Blast(Query) A.halleri   /   A.thaliana (NOT RECIPROCAL)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|919422|scaffold_100703.1
Sequence
ATGGTTTAAA GTCTTGAATG ATGGAGCGTC CTCCTACAAG TGAGGTAGCT AGGGCTCCAA TAGCGGTCTA TTGGGACATG AAGATGTGTC CGGTTCCCTA TGGCTATGAT GCTCGTCGTG TGGGTCCGTT TATTGAATCG AATTTGAGGC AGTTAGGCTA CACTGGTCCT ATCACCATCA CTGCCGTTGG CTTACTATCA GATGTCCCTG AACAGATCCT TGAAGCGCTC TTTTCCTCTG GAGTCTCTCT TTCTAACGTC CCCTACGGTA CCAGAGACGT GGCAACGCTT GTCTTGTTTC GTACTTTCGA TTTTCCACCT CCAGCTAGTT TCATGGTCAT ATCCCATCCA GAAGATGCCG CTGTATTTCT TGACTTGGTA AGTGAGATAG GATACAACAC TATTTTCCCG TTTCCACTCA AAGAAGCCGC TTCTCATCTA GAAGATGATG ATGGAAAGCC CCTCTGGGAA AACTTTCTTC GGGCAGAGCC TCCTGAGGAG GATAAGTGCA GTGAAACAGG TCAATCCTGG GTTTGCCGTG TGTGCCATGG AGTTACTGGC CGAGACTTTC AAAGCTTTAT GACTCATCTC TCTACTCCAA AACATATTTG GGAGTTTCCG CGCTGGCATA CCTATGCTAC TAGCGGCAAC CAAATCCCCT GTGTAAGCTC GGACGAATCG GTGGATGCTG TTGAAGAGGC TCCCCTTGAT TCTTATCCCG AGAATGCTAC TATCATGATT GGCCGCAGGA TTTTTAGGCA AAGGCTTGAG ACTGGGGAAC GTGAAGGTGA TGCAGAACAG CGTCGGAAAG AGAGCATAAG CGTGATCACA AGTTGTATGC TTCCAGTGCA GGCATTTATG AGGCTTGTAT ATGTTTCAGC TCTTGTGTTT GGAGATGCTT CATCCTTCCT TTTGCCTTGG AAGCGAGTAT TGAAGGTCAC AGATGCCCAG CTTGCTGAAG ACCTGTTTAG AGAGCATACG AGAAAAGTAG TCGTAGAGAA CATTTCATCG GCACTCAGCA TACTAAAATC CCGCACACTA GCAGCTTTGG CATCTGTCGT GGAAGAGCTT GAAAAGGTAC TGGAGTTTAA CAACCTGCTG GTTTCCTTGA AAAGTCATTC AGAGGCAGAT CAATTTGCAT GCGGGGTTGG TGATGAGTCT GATTTTGAGA GGAGAATGGA TGATTTAAAG CTCCTTTATA GAGCATATGT CACAGATGCT TTATCTGGTG GGCGCATAGC AGAAAACAAG CTCGTGGCAA TGAGCCAGCT TAGAAACATA CTCGGACTGG GAAAACGAGA AGCTGAAGCT ATTAGTGTTG ATGTTACGTC CAAGGCTTAC CGTAAAAGAC TTGCTAACGC TGTTTCTAAT GGTGACCTTG AAGCACAAGA CAGTAAAGCA AAATACCTTC AAAAGCTCTG CGAAGAGCTG CACTTTGATG CACAGATGGC AGGCGCAATC CATGAAGAAA TCTATCGGCA GAAGCTTCAA CAGTGTGTTA TTGATGGAGA GCTGAGCGAT GATAATGTTG CTGCTTTATT AAGGTTAAGA GTCATGCTCT GTATTCCCCA GCAAACTGTT GAGACAGCTC ATGCAGAAAT CTGTGGAACC ATATTTGAAA AGGTTGTCAG GGAGGCAATT TCTTCTGGAG TGGATGGTTA TGATGCTGAA ACTCGCAAAT CAGTAAGAAA GGCTGCACAT GGTCTTCGGT TATCCAGAGA GACTGCCATG TGTATTGCTA GCAAGGCTGT CCGTATGGTT TTCACAAACT ATATCAGACG AGCAAGAGCA GCAGAGAACC GCACTGAGTC AGCAAAGGAG CTCAAGAAGA TGATTGCTTT CAACACGTTA GTTGTGACTG AAATGGTGAC TGACATTAAG GGAGAATCTT CTGATAAGGC ACCTGAGGAG GACCCTGCTG AAATGGTGGC TAAAGAGAAA ACGGTCTCTG GGAACCTCCA AAGATCCCAA ATCCTGCGTT CAAAGGTCCT TGGAAAGCAA AGAATCAAGA ACCCGAACTA CAAGGGAAAA TGGAAGAACC CATGGATAGA TAATCCAGAA TTTGAGGATG ATCCAGATCT TTACGTTCTG AAGCCGATAA AATATGCAGG CATTGAAGTA TGGCAGGTGA AGGCTGGCTC TATCTTTGAC AATATCTTGA TCTGTGATGA CCCGGAATAT GCTAGAAGCA TCGTGGATGA CTATTTTGCC CAGCACAGGG AGTCTGAGAA GGAGTTATTT GCGGAGGCTG AGAAAGAAAA GCTAGAGAAG ATGAGTTACG AGCATGGCCA TACAAATCGA TGTTTACAGG AAGCTCGGAA AGCACGGGAA GAAGGTGAAC GCAGGCGGAA GGAAAGGGAC CACCGGTATG GAGACAGGAG GAGGCGTTAC AAACGACCGA ATCCACGTGA TTACATGGAT GATTACCATG ATGAGCTGTA AGGCGCAGTG GTGGACATTT G 
Length2461
Protein Sequence
Protein Residue
Map Locationscaffold_1: 2393730.. 2400522
Download Sequence
A.thaliana
AGI-codeAT1G06950.1
Descriptiontranslocon at the inner envelope membrane of chloroplasts 110
TAIR curator summaryEncodes a protein thought to be a part of the translocon at the chloroplast inner envelope. Involved in protein import into the chloroplast and chloroplast biogenesis.
Alias[ATTIC110][TIC110][ARABIDOPSIS THALIANA TRANSLOCON AT THE INNER ENVELOPE MEMBRANE OF CHLOROPLASTS 110][translocon at the inner envelope membrane of chloroplasts 110]
Gene coexpression
MR
MR Locus Description
1 Ahg919411
1.41421 Ahg311756 TRF-like 7
63.8279 Ahg943669 DHHC-type zinc finger family protein
70.1427 Ahg492316 RNA polymerase III RPC4
74.94 Ahg475539 DNAJ heat shock N-terminal domain-containing protein
89.2188 Ahg496551 GroES-like zinc-binding alcohol dehydrogenase family protein
95.184 Ahg489583
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression