Detail



ID : Ahg919466

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|919466|scaffold_100747.1
Sequence
TCTGTCTCTC ATAGATCCAT CTATGGCTTC CCTCGTCGAA TCTGGTTGGC AGTACCTTGT GACACATTTT AGCGACTTTC AACTGGCCTG CATTGGGAGT TTTCTCCTCC ATGAGAGCGT GTTTTTCTTA TCTGGACTCC CTTTCATTTA TCTAGAAAGG CAAGGCTTTC TCAGCAAGTA CAAAATTCAG ACAAAAAACA ACACACCTGC AGCCCAAGGA AAATGTATTA CTCGCCTGTT GCTTTATCAT TTCTGCGTAA ACTTGCCCTT GATGATGGTC TCCTATCCTG TCTTCAGAGC CATGGGAATG CGAAGCAGTT TTCCTCTACC GTCCTGGAAA GAAGTGTCTG CCCAGATATT ATTCTACTTC ATCATTGAGG ATTTTGTCTT CTATTGGGGT CATCGGATCT TGCATTCAAA ATGGCTGTAC AAGAACGTGC ACAGTGTGCA TCATGAATAT GCCACACCAT TTGGTTTGAC ATCAGAATAC GCTCACCCCG CTGAGATTCT ATTCCTGGGT TTTGCTACCA TAGTCGGTCC AGCTCTTACT GGCCCTCACC TGATTACTCT CTGGTTATGG ATGGTGCTGA GAGTGCTTGA GACAGTTGAG GCACATTGTG GTTATCATTT CCCATGGAGC CTCTCAAATT TTCTTCCTCT GTATGGAGGT GCTGACTTCC ATGACTACCA TCACCGACTG CTATACACAA AGTCTGGAAA CTACTCTTCA ACTTTTGTGT ATATGGACTG GATCTTTGGT ACTGACAAGG GCTACAGAAG ACTGAAGACC CTTAAAGAAA ACGGTGACAT GAAACAAACG TGAAATTACC AGTTTGGATT GCA 
Length843
Protein Sequence
Protein Residue
Map Locationscaffold_1: 2554801.. 2557033
Download Sequence
A.thaliana
AGI-codeAT1G07420.1
Descriptionsterol 4-alpha-methyl-oxidase 2-1
TAIR curator summaryArabidopsis thaliana sterol 4-alpha-methyl-oxidase mRNA
Alias[ATSMO1][SMO2-1][Arabidopsis thaliana sterol 4-alpha-methyl oxidase 1][sterol 4-alpha-methyl-oxidase 2-1]
Gene coexpression
MR
MR Locus Description
9.38083 Ahg471515 aminoalcoholphosphotransferase 1
31.6702 Ahg482183 Protein of unknown function (DUF1068)
45.0555 Ahg933903 heat shock protein 60-2
49.3559 Ahg490436
54.1849 Ahg490654 FMN-linked oxidoreductases superfamily protein
57.5239 Ahg488871 tubulin alpha-5
62.6099 Ahg486978 RHO guanyl-nucleotide exchange factor 7
70.6399 Ahg487306 Cellulose synthase family protein
72.2634 Ahg945524 detoxifying efflux carrier 35
75.9078 Ahg904392
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression