Detail



ID : Ahg919901

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|919901|scaffold_101182.1
Sequence
AGACTCTGCT GGTTAGCTCG ATGGAGACGC CACTTCTTCT TCTGGGACTT GAACTTCGAT GTCCTCCTCA TCTCTTCAAC ACTCACTCTC GTCCCTCTTC CTCTCTCTCC CTTCCCACCT TATCCTTACG AATCCTCACT TCGACGGCGG CAACGACATC TACCGCCGTT GTTGAATCAC CGGCGACCGT AGCAGAAGCT CCTCGTTCTA AACGTCATTC CAATTCATAT CTAACGAGGA AATCCGCCAT TTCTGAAGTT CAACGCTCCT CTGATTTTCT CTCTTCTCTG CAGAGATTAG AAAGAGTTTT GAAGGTACAA GATTTGAATG TAATTTTGCG TGATTTTGGA ATCTCTGGAA GATGGCAGGA TCTTATACAG CTCTTTGAAT GGATGCAGCA ACGTGGAAAA ATTAGTGTTT CAACTTACAG TAGCTGCATA AAGTTTGTGG GGGCAAAAAA TGTCTCCAAG GCTCTAGATA TATACCAAGG CATTCCAGAC GAGTCAACCA AAATCAATGT CTATATATGT AACTCCATTC TTAGTTGTCT GGTCAAGAAT GGAAAGCTTG ACAGCTGCAT CAAATTGTTT GATCAGATGA AGCGCGGTGG TCTGAAACCA GATGTGATTA CGTATAACAC GTTGCTTGCA GGTTGCATTA AGGTAAAAAA TGGATACCCT AAGGCTATTG AACTCATTGG AGAGCTGCCA CATAATGGAA TACAAATGGA CAGTGTGATG TATGGGACTG TCTTGGCCAT TTGTGCTTCA AATGGTCGAT GTGAAGAAGC TGAAAACTTT ATCCAGCAGA TGAAAGTTGA AGGTCATTCG CCCAACATAT ATCATTACAG CTCCTTGCTC AATTCGTATT CTTGGAAAGG AGATTACAAG AAAGCTGATG AGCTGATGAC CGAGATGAAA TCAATAGGAT TAGTGCCAAA CAAGGTGATG ATGACAACTT TACTAAAGGT TTATATCAAA GGAGGCTTGT TTGATAGATC AAGAGAATTA CTTTCTGAAC TTGAATCTGC AGGGTACGCC GAGAACGAGA TGCCATACTG TATGTTGATG GATGGTCTTT CAAAGGCGGG GAAGTTAGAA GAAGCGAGAT CAATCTTTGA TGATATGAAA GGGAAAGGTG TTAAATCCGA TGGCTATGCC AACAGCATCA TGATATCTGC TTTATGTCGA AGTAAGCGTT TTGAGGAGGC AAAAGAACTG TCAAGGGACT CTGAAACCAC TTATGAAAAA TGCGACTTGG TAATGTTAAA CACAATGCTC TGTGCCTATT GCAGAGCAGG AGAGATGGAA AGTGTTATGC GGATGATGAA GAAAATGGAT GAGCGAGCCG TTATTCCCGA TTATAATACT TTCCATATCT TGATCAAATA TTTCATCAAG GAGAAATTGC ACCTGCTTGC GTACCAAACC ACACTTGACA TGCACAGCAA AGGCCACAGG CTTGAGGAGG AACTTTGCTC ATCCTTGATT TATCATCTCG GCAAGATTAG AGCTCCCTCG GAAGCATTCT CAGTCTACAA TATGTTGCGA TACAGCAAAA GAACTATCTG CAAAGAGCTC CATGAGAAAA TTCTTCACAT TCTAATCCAT GGGAATCTCC TAAAAGACGC ATACATTGTA GTGAAGGACA ATGCAAAGAT GATCTCACAG CCTACTTTAA AGAAATTTGG CAGAGCTTTT ATGATCTCGG GTAATATTAA TTTAGTGAAT GATGTTCTGA AAGTCTTGCA TGGTTCTGGC CACAAAATCG ATCAGGTTCA GTTTGAGATT GCAATTTCTC GATACATTTC GCAGCCCGAT AAAAAGGAAT TACTTCTTCA ACTTCTACAA TGGATGCCTG GTCAAGGATA CATTGTTGAC TCCTCCACAA GAAACCTCAT TCTCAAGAAC TCTCATATGT TTGGTCGGCT ACTCATTGCA GAGATCTTGT CAAAGCATCA TGTCGCTTCA AGACCGCCCA TAAAATCACG ATCAGAGCCA AAATTTAGAA GTACATAAGA ATGTAATTTT TCTGGTTCTT T 
Length2041
Protein Sequence
Protein Residue
Map Locationscaffold_1: 4143347.. 4147720
Download Sequence
A.thaliana
AGI-codeAT1G10910.1
DescriptionPentatricopeptide repeat (PPR) superfamily protein
TAIR curator summary
Alias[EMB3103][EMBRYO DEFECTIVE 3103]
Gene coexpression
MR
MR Locus Description
8.66025 Ahg931037
15.2971 Ahg475897 PAS domain-containing protein tyrosine kinase family protein
23.4521 Ahg358798 NADH-ubiquinone oxidoreductase-related
24.6577 Ahg492065 Met-10+ like family protein
26.5141 Ahg319616
28.0179 Ahg931226 SWIB/MDM2 domain superfamily protein
28.9137 Ahg928584 plastid transcriptionally active 13
30.05 Ahg482466 thioredoxin O1
32.249 Ahg487031 RNA-binding (RRM/RBD/RNP motifs) family protein
33.3617 Ahg893579
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression