Detail



ID : Ahg920406

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|920406|scaffold_101687.1
Sequence
CACTACGAGC TAGTGGCGAT AATGGAGCAC GGCCCTACAT TCTTCTTCTT GCTTTCCACT CTCGTCCTCG CCGTTTCCGT TAAGTCTCCT CCGCCTCCTC TATTTCCCGA TGAAGCTCTC CCCACTAAAT CCGGATACCT TCCGGTTAAA CCAGCCTCAG GCTCCTTCAT GTTTTATGCC TTCTACGAAG CCCAAAAGCC GACCACACTT CTTCCCGACA CTCCGCTCCT CGTTTGGCTC CAAGGTGGGC CAGGCTGCTC TTCAATGATT GGCAACTTCT ACGAGCTCGG CCCGTGGCGC GTTATGTCAA GCGCCACTGA GCTTGAGCGC AACCCAGGCG CTTGGAACCG TCTCTTTGGG CTACTCTTCG TGGATAACCC TATAGGAGTC GGATTCAGCA TCGCCTCCTC TAAACAAGAC ATACCCACAA ATCAGAGACA GGTCGCTGAG CATCTTTACG CAGCTCTCGT GGAGTTCCTT GAGCAAAACC CAGGCTTTGA AAACCGACCG GTTTACTTCA CTGGCGAGAG CTACGCTGGT AAGTACGTTC CAGCCATTGG ATACTATATC CTTAAAGAGA AACCCAATGG GAAAGTGAAT CTAAAGGGCC TAGCCATTGG AAACGGGCTG ACCGATCCCG TGACCCAGGT CCAAACCCAT GCGGTCAATG TTTACTACTC GGGTCTGGTC AACGCTAAAC AGAGAGGTGA AGTGGAGAAA GCGCAGGAGA TAGCCGTAGC TCTCGTGAAG TCACAGAAAT GGCGTGAAGC AGCAGACGCG AGGACGGAGC TGTTGACGCT ACTAAGTAAC ATGACAGGAC TCGCGACGCT ATACAACACG GCACGTTCGA TTCCGTACAG AACAGACCTC GTGTTGGACC TTCTAAACCA GAGAGAGGCT AAGCGAGTTT TGGGAGTGAG CGAAACAATG CGTTTTGAGG ATTGTAGTGA TGAAGTAGAA GATGTGCTGC GAGAAGATGT GATGAAGAGC GTTAAGTTCA TGGTGGAGTA CGCATTAGAG AGGACTCAAG TGTTGCTGTA TCAAGGCATG CTGGATCTAA GAGACGGTGT CGTTTCGACG GAGGAGTGGG TGAAGACTAT GAACTGGTCG GGGTTGGGGA TGTTCTCGAC GGCGGAGAGG AGGGTGTGGA AGGATGAAGA CGGTGCGGTC GCTGGATATG TTCAAAGATG GGGGAATTTG TGCCACGTGG CGGTTTCAGG AGCTGGACAT TTTGTTCCGA CAGATAAAGC TGTTAATTCA AGGGATATGA TTGAAGGCTG GGTTTTGGGG AAAGGATTGT TCGGTGGTAA TGAAGATGTG AAGCAGACAA TTTCATCGAG CTTTTACAAT TCAATCTAGA TAAAGGTTGT GTGTACTTG 
Length1379
Protein Sequence
Protein Residue
Map Locationscaffold_1: 6076601.. 6077975
Download Sequence
A.thaliana
AGI-codeAT1G15000.1
Descriptionserine carboxypeptidase-like 50
TAIR curator summary
Alias[scpl50][serine carboxypeptidase-like 50]
Gene coexpression
MR
MR Locus Description
17.6068 Ahg475878 photosystem II BY
25.0998 Ahg940828 magnesium-chelatase subunit chlH, chloroplast, putative / Mg-protoporphyrin IX chelatase, putative (CHLH)
32.619 Ahg486407 enzyme binding;tetrapyrrole binding
34.7851 Ahg473204 chlorophyll A/B binding protein 1
37.1887 Ahg480276 Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein
42.6615 Ahg491249 Leucine-rich repeat protein kinase family protein
44.6318 Ahg473393 pinoresinol reductase 1
48.4974 Ahg484417 tonoplast intrinsic protein 2
54 Ahg473203 chlorophyll A/B-binding protein 2
55.9285 Ahg938360 Eukaryotic aspartyl protease family protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression