Detail



ID : Ahg920502

Blast(Query) A.halleri   /   A.thaliana (NOT RECIPROCAL)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|920502|scaffold_101783.1
Sequence
AGAGACGTAA CAGATAAGCG ATGGCGGGTG CAACAGCAAG TGGCGGCAAC AGAACTTTCT CAAACTCTCC TCTCATAGCA AACTCTGATT CTAATCAGAT TGTTGTCCCT GAGAAGAAGA GCTGGAAAAA CTTCTTCTCG TACTTAGGCC CTGGATTTCT TGTCTCAATT GCTTACATTG ATCCTGGAAA CTCTTTGGTG ATTCAATCTC TCGCTGCAAA TCTCGGTGTT GTCACTGGAA AGCACTTAGC AGAGCATTGC AGAACTGAAT ACTCCAAAGT TCCAAACTTT ATGTTATGGG TAGTTGCAGA AATCACTGTA GTAGCTTGTG ACATTCCAGA AGTTTGTAAT GCCTCAGATT TGAGTCCAGA AGATCGAGCA AGTTGCCAAG ATTTGGACTT AAACAAAGCT TCATCTCTGC TGCGGAATGT TGTAGATAAA TGGAGCTCAA AGCTATTTGC AATTGCGTTG CTTGCTTCCG GTCAGAGTTC AACAATAACC GGAACATATG CTGGACAATA CGTTATGCAG GGGTTTCTTG ATTTAAGACT AGAACCATGG CTCAGAAACT TGCTAACAAG ATGCTTGGCT ATAATCCCAA GTTTGATCGT TTCTCTGATA GGTGGCTCAG CTGGAGCCGG AAAGTTAATC ATCATTGCGT CGATGATCTT ATCCTTTGAA CTCCCATTTG CTTTAGTACC ACTTCTCAAA TTCACAAGCA GCAAAACCAA AATGGGCTCA CACGCCAATT CACTTGTGAT TTCATCTGTG ACTTGGATCA TTGGTGGACT TATTATGGGT ATAAACATTT ACTATCTAGT AAGCAGCTTC ATCAAGCTGC TTCTCCATAG TCACATGAAC CTTGCAGCCA TTGTTTTCTT AGGACTTCTT GGATTCTCAG GCATTGCCAT TTACTTAGCA GCCATTGGTT ACCTTGTCCT CCGTAAAAAC AGAGAGTCCA CACATTGTAA ACATGCAGTT ACCTAATAGA GTAGCCGTTA CAAGAA 
Length1006
Protein Sequence
Protein Residue
Map Locationscaffold_1: 6436625.. 6438704
Download Sequence
A.thaliana
AGI-codeAT1G15960.1
DescriptionNRAMP metal ion transporter 6
TAIR curator summarymember of Nramp2 family
Alias[ATNRAMP6][NRAMP6][NRAMP metal ion transporter 6]
Gene coexpression
MR
MR Locus Description
3.60555 Virus1719
23.6643 Ahg940134 Ubiquitin-like superfamily protein
34.2491 Ahg950468
43.1277 Virus0925
58.7367 Ahg486005 UDP-Glycosyltransferase superfamily protein
69.2604 Ahg891031
75.7958 Ahg346899 Protein of unknown function (DUF784)
77.7689 Ahg907949
77.8203 Ahg947330 RING/U-box superfamily protein
81.8291 Ahg947060
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression