Detail


ID : Ahg920538

Blast(Query):  A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|920538|scaffold_101819.1
Sequence
CGACGCCATT GTTGGACTGA AGATGTCAGG ATTCGAAGAT GGATTTTCAG CTGAAAAGCT ATTCTCACAG GGATACTCAT ACACCTACGA CGATGTGATC TTTCTACCTC ACTACATCGA CTTTTCCACG GACGCCGTCT CGTTATCCAC GCGCCTCAGC AAGCGCGTCC CACTCTCGAT CCCATGCGTC GCTTCGCCGA TGGACACTGT TTCTGAGTCC CACATGGCTG CTGCAATGGC TGCGCTTGGA GGAATCGGAA TCGTGCACTA TAATTGTGAC ATCGAGACTC AAGCTTCCGT CATCCGTCAC GCCAAATCGC TTCAAGTTCC GATTGCGTCT GATGCTGTTT TCAAATGCCC AGAGCATCAG ATTGGTTCGG TTGATGATTT TGGTCCTTCT TCCTTCGTTT TCGTCTCGCA GACAGGAACA CTGACACCGA AATTGTTGGG TTATGTCTCA AAATCGGAGT GGTCGAGTAT GAAAGATGAC CAAAAGGAGA TGAAGATATA TGATTACATG AGGAGTTGTG AGAGCAAAGA TTACTATGTG CCATGGGATA TTGATCTTGA CAAGATCGAG GCGGTTTTGG AAGATAAGCA GAAAGGATTT GTGGTTCTGG AGAAGGATGG TGAGACCGTG AACGTAGTAA CAAAAGACGA TGTGGAGAGG GTTAAAGGAT ATCCCAAGTC AGGGTCAGGA ACTGTTGGTG CAGACAAGAA ATGGATGGTG GGTGCGGCTA TAGGGACAAG GGATTCAGAC AAGGAGAGGC TAGAGCATTT AGTGAAAGCT GGAGCTAACG TTGTGGTGCT GGATAGTTCG CAAGGGAACT CAGTTTACCA GCTTGAGATG ATCAAGTATG TGAAGAATAC GTATCCGGAG TTGGATGTGG TCGGTGGGAA TGTGGTGACT ATGTACCAGG CAGAGAACTT GATCAAAGCA GGAGTTGATG GGTTGAGAGT TGGTATGGGA TCTGGATCGA TATGCACAAC ACAAGAGGTT TGTGCCGTTG GACGAGGACA GGCTACTGCC GTGTACAAAG TCTCGACGCT AGCTGCTCAG CACGGTGTAC CTGTTATCGC AGATGGTGGT ATCTCAAACT CAGGTCACAT TGTGAAGGCT CTAGTTCTTG GAGCATCAAC TGTGATGATG GGAAGTTTCT TAGCTGGAAG CACCGAGGCT CCGGGAGCTT ATGAATATCG AAACGGCAGG AGAGTGAAGA AATACAGAGG TATGGGTTCT TTAGAAGCAA TGACCAAAGG AAGTGACCAG AGATACTTGG GAGATACCGC GAAACTCAAG ATTGCACAAG GAGTCGTTGG AGCGGTTGCG GATAAAGGCT CAGTGTTGAA GTTTATACCT TACACAATGC ATGCCGTGAA GCAAGGTTTT CAAGATCTCG GTGCTTCTTC TTTGCAGTCT GCTCACGAGC TATTGAGAGA TAATACCCTT AGACTCGAGG CTCGTACCGG TGCAGCACAG GTAGAAGGTG GAGTCCATGG ACTGGTGTCT TACGAAAAGA AATCGTTTTA GCGTTCCCGA GTTTACTTTC T
Length1551
Protein Sequence
Protein Residue
Map Locationscaffold_1: 6538781.. 6540777
Download Sequence
A.thaliana
AGI-codeAT1G16350.1
DescriptionAldolase-type TIM barrel family protein
TAIR curator summary
Alias
Gene coexpression
MR
MR Locus Description
3.87298 Ahg352403
8.18535 Ahg324031 phosphoribosylformylglycinamidine cyclo-ligase, chloroplast / phosphoribosyl-aminoimidazole synthetase / AIR synthase (PUR5)
10.8628 Ahg490185 copper ion binding
11.4018 Ahg488658 MIF4G domain-containing protein / MA3 domain-containing protein
13 Ahg927333 binding
13.0767 Ahg492148 S-adenosyl-L-methionine-dependent methyltransferases superfamily protein
14 Ahg492264 fibrillarin 2
15.6844 Ahg934372 Tetratricopeptide repeat (TPR)-like superfamily protein
20.347 Ahg478749 Ribosomal protein L30/L7 family protein
21.166 Ahg943407 sequence-specific DNA binding;sequence-specific DNA binding transcription factors
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression