Detail



ID : Ahg920584

Blast(Query) A.halleri   /   A.thaliana (NOT RECIPROCAL)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|920584|scaffold_101865.1
Sequence
TATTTTAGCC ATAAAATTGG ATGGCTAGCT CTACTGTGGT TAAACAAGCA GAAAAGGTTG AAGCGCATAT CGGAACTCGC AATGCTAGTG TGAAATCTCC AGTAGAGGAT CCAATGGTTG TGCTTCAGAA AGGATATTCG CTGACTATTA TATTAGCCGT TTTGACATTT GGCGCGTCGA CTCGCTGGCT GCTTTACACA GAACAAGCTC CATCTGCTTG GGTGAATTTT TTCATGTGTG GCTTGGTTGG CATTATCACA GCCTATGTCT TTGTCTGGAT ATCCAGATAT TCTACTGACT ATAAGTATGA GCCTGTTCGG ACGTTGGCTC TTGCTAGCTC CACTGGTCAT GGAACCAATA TAATTGCTGG GGTCAGCTTG GGTCTGGAGT CCACGGCTCT TCCTGTTTTA GTTACAAGTG TAGCTATCAT TTCTGCTTTT TGGCTGGGCA ATACCTCGGG ACTAATGGAT GAAAAGGGAA ACCCCATTGC AGGTCTATTT GGAACAGCTG TAGCTACAAT GGGAATGCTG AGCACTGCAG CTTATGTTCT TACAATGGAC ATGTTTGGTC CTATAGCTGA TAATGCAGGT GGGATTGTTG AGATGAGCCA GCAGCCAGAA AGTGTCCGTG AGATCACTGA TGTTCTTGAT GCTGTTGGGA ATACCACAAA AGCAACAACA AAAGGGTTTG CTATTGGATC TGCAGCCCTT GCATCATTCC TTCTTTTTAG TGCCTATATG GATGAGGTTG ATATTGCGAT CCCAGAAGTC TTCATCGGTG GGTTATTAGG TGCCATGCTT ATATTCCTGT TTAGCGCTTG GGCTTGTGCA GCAGTTGGTC GAACTGCACA GGAGGTTGTC AATGAAGTAA GAAGACAGTT CATTGAGAGG CCTGGCATAA TGGACTACAA GGAGAAGCCA GATTATGGTC GATGTGTTGC CATTGTCGCA TCTTCAGCTT TGAGGGAAAT GATAAAACCA GGAGCTTTGG CTATAATATC ACCCACTGCA GTTGGTTTTG TGTTCCGGAT CTTGGGATAC TACACAGGAC AACCTCTGCT AGGAGCTAAA GTAGTAGCTG CAATGCTAAT GTTTGCAACG GTGTGTGGTA TCTTAATGGC TCTTTTCTTA AATACAGCAG GAGGTGCTTG GGACAATGCA AAGAAATACA TTGAGACAGG AGCTCTAGGA GGCAAAGGAA GTGATTCTCA TAAAGCTGCA GTAACTGGTG ATACTGTGGG AGACCCTTTC AAGGACACAG CAGGACCGTC GATTCACGTT CTCATCAAAA TGTTGGCGAC TATCACGCTT GTCATGGCTC CAATCTTTCT CTGATAAAAA AGACATCTAA TCCTT 
Length1355
Protein Sequence
Protein Residue
Map Locationscaffold_1: 6698618.. 6700594
Download Sequence
A.thaliana
AGI-codeAT1G16780.1
DescriptionInorganic H pyrophosphatase family protein
TAIR curator summaryEncodes a type II H+-PPases that localizes to and function as a proton pump of the Golgi apparatus in most tissues except for mature leaves.
Alias[AtVHP2;2][VHP2;2]
Gene coexpression
MR
MR Locus Description
7.74597 Ahg942773 TBP-associated factor 14
16.3095 Ahg314088 Protein of unknown function, DUF547
41.1096 Ahg313821 NAC domain containing protein 11
56.8331 Ahg946973 Protein of unknown function (DUF295)
62.1048 Ahg939617
62.1611 Ahg896744
66.3928 Ahg924298 Uncharacterized protein family (UPF0016)
66.8132 Ahg329713 Pectin lyase-like superfamily protein
70.484 Ahg476285 Transmembrane amino acid transporter family protein
72.111 Ahg946181 low-molecular-weight cysteine-rich 38
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression