Annotation |
Description | jgi|Araly1|921008|scaffold_102289.1 |
Sequence |
CAATCGAATC AAGATTAACT ATGGCTGAGG AGTACAAGAA CAACGTTCCC GAGCACGAGA CACCAAAGGT CGCAACAGAG GAATCACCAG CGACGACTAC AGAGGTTACG GATCGTGGAT TGTTTGATTT CTTGGGGAAG AAGGAAGAGG AAGTGAAACC TCAAGAGACG ACGACGCTCG AGCCTGAGTT CGATCACAAG GCTCAGAACT CTGAACCGGA GTTAGCTGCG GAGCACGAGG AAGTGAAGGA GAACAAGATT ACTCTCCTTG AAGAGCTTCA AGAGAAGACT GAGGAAGATG AGGAGAACAA GCCTAGTGTC ATCGAAAAGC TTCACCGATC CAACGGCTCT GCTTCCTCTT CGAGCGATGA AGAAGGTGAG GAGAAGAAGG AGAAGAAGAA GATCGTTGAA GGAGAGGAAG AGAAGAAAGG ACTAGCGGAG AAGATCAAGG AGAAGCTTCC AGGCCACCAC GACAAGAAAC CAGAGGATGA TGTACCAGTT TCCACCACCA TCCAGGTACC AGTGTCGGAG AGTGTGGTGG AGCATGACCA ACCCGAGGAA GAGAAGAAAG GACCAGTGCA GAAGATCAAG GAGAAGCTTC CTGGCCACCA CGACAAGACT GCAGAGGATT CACCAGCTGT CACCAGCACG CCGTTGGTTG TAACGGAGCA TCCAGTGGAG CCTACGACGG AGCATCCGGA GGAGCATCCG GAGGAGAAGA AGGGCATTTT GGGAAAGATT AAAGAGAAGC TTCCAGGTTA TCATGCCAAG ACCACTGAAG AGGAAGAGAA GAAAGTAAAA GAGACTGATG CTTAAGAAAA ATGGTTAAAG AATGAATAAT GATGTGGGAG T |
Length | 851 |
Protein Sequence | |
Protein Residue | |
Map Location | scaffold_1: 8341759.. 8342736 |
Download Sequence |
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A.thaliana |
AGI-code | AT1G20440.1 |
Description | cold-regulated 47 |
TAIR curator summary | Belongs to the dehydrin protein family, which contains highly conserved stretches of 7-17 residues that are repetitively scattered in their sequences, the K-, S-, Y- and lysine rich segments. Cold regulated gene, amino acid sequence homology with Group II LEA (late embryogenesis abundant) proteins. Also responds to osmotic stress, ABA, dehydration and inhibits e.coli growth while overexpressed. COR47 and RAB18 double overexpressor plants are cold tolerant. |
Alias | [AtCOR47][COR47][RD17][cold-regulated 47] |
Gene coexpression |
MR |
MR | Locus | Description |
1 |
Ahg472273 | Dehydrin family protein |
3 |
Ahg924738 | flavin-monooxygenase glucosinolate S-oxygenase 4 |
3.74166 |
Ahg481185 | Late embryogenesis abundant protein, group 6 |
7.34847 |
Ahg495299 | CAP160 protein |
7.48331 |
Ahg941255 | |
8.77496 |
Ahg496967 | Dehydrin family protein |
9.48683 |
Ahg333508 | Late embryogenesis abundant protein |
9.79796 |
Ahg949787 | low-temperature-responsive protein 78 (LTI78) / desiccation-responsive protein 29A (RD29A) |
10.583 |
Ahg483960 | TSPO(outer membrane tryptophan-rich sensory protein)-related |
11.225 |
Ahg325294 | Late Embryogenesis Abundant 4-5 |
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RNA-seq |
Seasonal expression (July 2011 to June 2013) |
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The four seasons |
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Growth Chamber expression |
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